DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and kcnv1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_002939028.1 Gene:kcnv1 / 100487006 XenbaseID:XB-GENE-956997 Length:503 Species:Xenopus tropicalis


Alignment Length:515 Identity:138/515 - (26%)
Similarity:217/515 - (42%) Gaps:149/515 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ENRIILNVSGIRYETYKATLKKIPATRLSRLT--------EALANYDPVLNEYFFDRHPGVFTQI 60
            ::.:.:||.|.|:......|...|.|||.||.        |...:.:.:.|||||||...:|..|
 Frog    58 KDHLTINVGGSRFILSHKVLSNHPETRLGRLVSSGGQEVYELCDDANLMDNEYFFDRSSQMFKYI 122

  Fly    61 LNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKP 125
            :|:|:||.||...::|...|.:|:::||:|...::.||...|      .....:.:.|||   |.
 Frog   123 MNFYKTGHLHVMEELCAVSFLQEIQYWGIDELNIDLCCRERY------YRKKLMSESLDI---KK 178

  Fly   126 TEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKT 190
            .||:|..    ||...:|.:  ::..:..:|.:.::|.||..||....:|:.||.:|:.:..|.:
 Frog   179 DEEEIEA----EEEDFSGVV--FEHFRQTLWDILEKPGSSVAAKTFGTLSMTFIVISIANMVLIS 237

  Fly   191 HPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSS 255
            .                                      ..:||.||                  
 Frog   238 S--------------------------------------EMNSIDPP------------------ 246

  Fly   256 GNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYV 320
                                          :||.                              :
 Frog   247 ------------------------------LLNA------------------------------L 251

  Fly   321 ELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-TDVMQRM-GEYTGL------LE 377
            |.:|..||.:|:.:|.:...:..:|::|.|||||..|.|.|| |.:::.: ||.|.|      ::
 Frog   252 EYICITWFTLELALRFLCVKHKCRFLRSVVNIIDIVAILPFYITLIVENLYGESTELENVGRIVQ 316

  Fly   378 AFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQ 442
            :..::|.:|:.||.|||.||:.|..|.....:|:.||:.||.:||..|::|.|..|  .:.||..
 Frog   317 SLRLLRSLRMLKLGRHSTGLKSLGMTIAQCYEEVGLLLLFLSVGISIFSALEYAVE--HNIPDTT 379

  Fly   443 FKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFY 502
            |.|:|...|||..:||||||||:.|.|..|..|..||.|:|:|.:|||:.:|...|:..|
 Frog   380 FTSVPNAWWWATTSMTTVGYGDIRPDTTFGKIVAFLCILSGILVLALPIAIINDRFAACY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 34/99 (34%)
BTB_2 7..97 CDD:280393 33/97 (34%)
Ion_trans 307..506 CDD:278921 75/204 (37%)
Ion_trans_2 <449..499 CDD:285168 24/49 (49%)
kcnv1XP_002939028.1 BTB_POZ_KCNV1 61..169 CDD:349731 36/113 (32%)
Ion_trans 215..439 CDD:366146 87/341 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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