DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34189 and swm-1

DIOPT Version :9

Sequence 1:NP_001097347.1 Gene:CG34189 / 5740826 FlyBaseID:FBgn0085218 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_505346.1 Gene:swm-1 / 182893 WormBaseID:WBGene00023417 Length:135 Species:Caenorhabditis elegans


Alignment Length:57 Identity:23/57 - (40%)
Similarity:26/57 - (45%) Gaps:4/57 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CGENATMVRCAGVCPETCAFKS-LKCPKYCGVN-CVCKPDYVFNENLQLCILKTDCP 107
            |.||.|...|...|..||...: ..|.|.|.|| |.|...:| ...|: ||.|.|||
 Worm    80 CPENETFFGCGTACEATCEKPNPTVCTKQCIVNVCQCSKGFV-RHGLR-CIDKKDCP 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34189NP_001097347.1 TIL 53..106 CDD:280072 20/54 (37%)
swm-1NP_505346.1 TIL 20..73 CDD:366828
TIL 80..133 CDD:366828 20/54 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1625853at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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