DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and lsamp

DIOPT Version :10

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_073779341.1 Gene:lsamp / 664692 ZFINID:ZDB-GENE-090108-1 Length:363 Species:Danio rerio


Alignment Length:289 Identity:80/289 - (27%)
Similarity:118/289 - (40%) Gaps:27/289 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 NVTVAVGRDANLPCVVEHLGGYKVAWIHIDRQMILTIHRHVISRIPRYS-ITYTDNTWLLHVNQA 115
            |:|:..|....:.|.|:.... ||||  ::|..|:.......|..||.. :|.....:.|.:.:.
Zfish    66 NITIRQGDTTVIRCYVDDKVS-KVAW--LNRSNIIFAGEDKWSLDPRVELVTQGQLEYSLRIQKV 127

  Fly   116 HQDDRGYYMCQVNTNPM--ISQVGYLQVVVPPNILDIESTPSSVAVRENQNINMTCRADGFPAPK 178
            ...|.|.|.|.:.|...  .||| ||.|.||..|..:.   ..:.|.|..|:.:||.|:|.|.|.
Zfish   128 DVFDEGPYTCSIQTKQQSKTSQV-YLIVQVPAIIYKVS---EDITVNEGSNVTLTCLANGRPDPA 188

  Fly   179 IIWR--REDGEEIAVEKKKKVLVYDADVLPLTKVSRNEMGAYLCIATNGVPPSVSKRIILDVEFS 241
            |.||  ....|.:.|          .:.|.::.|.|::.|.|.|.|:|.|.....|.:.:.|.:.
Zfish   189 ITWRLLNPSAEALDV----------GEYLEISGVVRSQAGRYECKASNDVSTPDVKYVNVVVNYP 243

  Fly   242 PMIWVPNQLVGAPSGTDVTIDCHTEAHPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKLTIR 306
            |.|........|.....| :.|...|.|:....| |.....|.|.:..|.....|   ...|.:.
Zfish   244 PYIKDVRSSETAVGQAGV-LHCEASAVPQPEFEW-YRDERRLSSSQSLTIQVSGS---RTVLVVA 303

  Fly   307 NLQYGDFGNYRCISKNSLGETEGSIRVYE 335
            |:...|:|||.|::.|.||....|:.:|:
Zfish   304 NVTEEDYGNYTCVATNRLGVHNASVFLYK 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG_like 51..143 CDD:214653 27/93 (29%)
Ig strand B 61..65 CDD:409353 0/3 (0%)
Ig strand C 74..78 CDD:409353 3/3 (100%)
Ig strand E 105..112 CDD:409353 1/6 (17%)
Ig strand F 122..127 CDD:409353 2/4 (50%)
Ig strand G 134..137 CDD:409353 2/2 (100%)
Ig 145..238 CDD:472250 25/94 (27%)
Ig strand B 165..169 CDD:409353 0/3 (0%)
Ig strand C 178..182 CDD:409353 1/3 (33%)
Ig strand E 203..207 CDD:409353 1/3 (33%)
Ig strand F 217..222 CDD:409353 2/4 (50%)
Ig strand G 231..234 CDD:409353 1/2 (50%)
Ig 242..333 CDD:472250 24/90 (27%)
Ig strand B 259..263 CDD:409353 1/3 (33%)
Ig strand C 272..276 CDD:409353 0/3 (0%)
Ig strand E 295..305 CDD:409353 2/9 (22%)
Ig strand F 315..320 CDD:409353 3/4 (75%)
Ig strand G 328..331 CDD:409353 0/2 (0%)
lsampXP_073779341.1 None

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