DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and CG13506

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster


Alignment Length:305 Identity:72/305 - (23%)
Similarity:125/305 - (40%) Gaps:28/305 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRDANLPCVVEHLG-GYKVAWIHIDRQMILTIHRHVISRIPRYSITYTDNTWLLHVNQAHQDDRG 121
            |.|..|.|...:.. ...|.|  ...::|:...::.||:  |......::..|.:|:....||  
  Fly    84 GDDVILNCDARNFQLSNAVVW--YKNRIIIANGQNPISQ--RVQCMLNNSILLRNVSPEDSDD-- 142

  Fly   122 YYMCQVNTNPMISQVGYLQVVVPPNIL--DIESTPSSVAVRENQNINMTCRADGFPAPKIIWRRE 184
             |.|:: ....:.|...|:|....:||  |.:.|..|...|:..:..:.||........|.|...
  Fly   143 -YYCE
I-LPQRVRQHTALRVGARLSILCDDRDITDRSQTFRQGDHHKLECRTYLPDNATIKWSFN 205

  Fly   185 D--GEEIAVEKKKKVLVYDADVLPLTKVSRNEMGAYLCIATNGV--PPSVSKRIILDVEFSPMIW 245
            |  |:..:|:.:..|::.|       .|.....|.|.|:|.:|.  ||..:  :.:||::||::.
  Fly   206 DLNGQPSSVDNQNGVIILD-------NVDEKNAGDYQCLADDGSRHPPHGT--VHIDV
QYSPIVS 261

  Fly   246 VPNQLVGAPSGTDVTIDCHTEAHPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKLTIRNLQY 310
            .....|....|....:.|:..|.|....|::.:...:..|.||....:.::......|.:|.:..
  Fly   262 THRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQLSDKYSLKDSVHNDHNRTTLIVREVTD 326

  Fly   311 GDFGNYRCISKNSLGETEGSIRVYEIPLPSTPSKQVTHTTVESRE 355
            .|.|.|.|..:|::|..|  ::|:....|.||  |....|||..:
  Fly   327 SDLGEYLCQVENAIGSNE--VKVHVSYNPETP--QFEDMTVEGNK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 19/85 (22%)
Ig 145..238 CDD:416386 23/98 (23%)
Ig strand A 145..149 CDD:409353 2/5 (40%)
Ig strand A' 154..159 CDD:409353 1/4 (25%)
Ig strand B 165..172 CDD:409353 2/6 (33%)
Ig strand C 178..183 CDD:409353 2/4 (50%)
Ig strand C' 185..187 CDD:409353 1/3 (33%)
Ig strand D 195..199 CDD:409353 1/3 (33%)
Ig strand E 203..209 CDD:409353 0/5 (0%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353 0/7 (0%)
Ig 242..333 CDD:416386 19/90 (21%)
Ig strand A' 250..253 CDD:409353 1/2 (50%)
Ig strand B 259..266 CDD:409353 1/6 (17%)
Ig strand C 272..277 CDD:409353 1/4 (25%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 0/3 (0%)
Ig strand E 295..305 CDD:409353 1/9 (11%)
Ig strand F 314..322 CDD:409353 3/7 (43%)
Ig strand G 325..334 CDD:409353 2/8 (25%)
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 15/68 (22%)
IGc2 83..146 CDD:197706 15/68 (22%)
IG_like 176..254 CDD:214653 19/86 (22%)
Ig 176..239 CDD:299845 15/69 (22%)
I-set 258..349 CDD:254352 20/92 (22%)
Ig 275..348 CDD:143165 16/74 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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