DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and dpr4

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster


Alignment Length:218 Identity:60/218 - (27%)
Similarity:89/218 - (40%) Gaps:39/218 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EPRFAQPI------PNVTVAVGRDANLPCVVEHLGGYKVAWIHIDRQMILTIHRHVISRIPRYSI 101
            |..::||.      ..||..||:.|.|.|.|.:||...|:||......|||:.....:...|:..
  Fly    39 ETPYSQPYFDNSSRREVTATVGQAALLHCRVRNLGDRAVSWIRKRDLHILTVGILTYTNDQRFQS 103

  Fly   102 TYTDNT--WLLHVNQAHQDDRGYYMCQVNTNPMISQVGYLQVVVP-PNILDIESTPSSVAVRENQ 163
            .:::.:  |.|.::.....|.|.|.|||:|.|.|||...|.|||. ..||.    .:.:.::...
  Fly   104 LHSEGSDEWTLRISSPQPRDSGTYECQVSTEPKISQGFRLNVVVSRAKILG----NAELFIKSGS 164

  Fly   164 NINMTCRADGFPAPK--IIWRREDGEEIAVEKKKKVLVYD--------------ADVLPLTKVSR 212
            :||:||.|...|.|.  |.|          .|.|:|:.|.              ...|.:.|.:.
  Fly   165 DINLTCLAMQSPVPPSFIYW----------YKGKRVMNYSQRGGINVITERSTRTSKLLIAKATP 219

  Fly   213 NEMGAYLCIATNGVPPSVSKRII 235
            .:.|.|.|..::....||...:|
  Fly   220 ADSGNYTCSPSSSDSASVVVHVI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 32/93 (34%)
Ig 145..238 CDD:416386 23/107 (21%)
Ig strand A 145..149 CDD:409353 1/3 (33%)
Ig strand A' 154..159 CDD:409353 0/4 (0%)
Ig strand B 165..172 CDD:409353 4/6 (67%)
Ig strand C 178..183 CDD:409353 2/6 (33%)
Ig strand C' 185..187 CDD:409353 0/1 (0%)
Ig strand D 195..199 CDD:409353 2/3 (67%)
Ig strand E 203..209 CDD:409353 1/5 (20%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353 2/6 (33%)
Ig 242..333 CDD:416386
Ig strand A' 250..253 CDD:409353
Ig strand B 259..266 CDD:409353
Ig strand C 272..277 CDD:409353
Ig strand C' 281..283 CDD:409353
Ig strand D 289..293 CDD:409353
Ig strand E 295..305 CDD:409353
Ig strand F 314..322 CDD:409353
Ig strand G 325..334 CDD:409353
dpr4NP_001014616.2 V-set 53..146 CDD:284989 31/92 (34%)
IG_like 53..145 CDD:214653 31/91 (34%)
ig 153..227 CDD:278476 18/87 (21%)
IG_like 161..>227 CDD:214653 17/75 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11916
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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