DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and Prtg

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001032740.2 Gene:Prtg / 315806 RGDID:1307157 Length:1193 Species:Rattus norvegicus


Alignment Length:388 Identity:83/388 - (21%)
Similarity:131/388 - (33%) Gaps:108/388 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IYMTNLVTHVMMDEPRFAQPIPN----VTVAVGR------DANLPCV-VEHLGGYKVAWIHIDRQ 83
            |.:|.|.....:.|.:..|.:.|    ::.|.||      :....|: |...|.......|:...
  Rat    62 IKVTWLKNGAKLSENKRIQVLSNGSLYISEAEGRRGEQSDEGFYQCLAVNKYGAILSQKAHLTLS 126

  Fly    84 MILTIHRHVISR------IPRYSITYTDN-----TW---------------------LLHVNQAH 116
            .|.....|.:|.      :.|:|...:..     ||                     :|.:..|.
  Rat   127 TISAFEVHPVSTEVPEGGVARFSCKISSTPPAVITWEFNRTALPMTMDSRVTALPSGVLQIYDAG 191

  Fly   117 QDDRGYYMCQVNTN-----PMISQVGYLQVVVPPN------ILDIESTPSSVAVRENQNINMTCR 170
            .:|.|.|.|...|:     .|.:.:    .:||.|      :..|.::|.:|....:|.:.:.|.
  Rat   192 PEDAGKYRCVAATHAHKRKSMEASL----TIVPANETRSFYMPTIIASPQNVTASLHQTVVLECM 252

  Fly   171 ADGFPAPKIIWRREDGEEIAVEKKKKVLVYDADVLP-----LTKVSRNEMGAYLCIATNG----- 225
            |.|:|.|.|.|.|.|        .|.:.|::..||.     ::.|.....|.|:|.||..     
  Rat   253 ATGYPKPIISWSRLD--------HKSIDVFNTRVLGNGNLIISDVKLQHAGVYVCRATTPGTRNF 309

  Fly   226 ----------VPPSVSKRIILDVEFSPMIWVPNQLVGAPSGTDVTIDCHTEAHPKAIIYWVYNSV 280
                      .|||.       ||     | |..|....:|| ....|..|..|...:.|:.|..
  Rat   310 TVAMATLTVLAPPSF-------VE-----W-PESLTRPRAGT-ARFVCQAEGIPSPKMSWLKNGR 360

  Fly   281 MVLPSKKYKTDYTENSYRAHMKLTIRNLQYGDFGNYRCISKNSLGETEGSIRVYEIPLPSTPS 343
            .:..:.:.|      .|.:  ||.|..:...|...|:|:::||.|......|:..:.....||
  Rat   361 RIHSNGRIK------MYNS--KLVINQIIPEDDAIYQCMAENSQGSVLSRARLTVVMSEDRPS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 23/139 (17%)
Ig 145..238 CDD:416386 27/118 (23%)
Ig strand A 145..149 CDD:409353 1/9 (11%)
Ig strand A' 154..159 CDD:409353 2/4 (50%)
Ig strand B 165..172 CDD:409353 1/6 (17%)
Ig strand C 178..183 CDD:409353 2/4 (50%)
Ig strand C' 185..187 CDD:409353 1/1 (100%)
Ig strand D 195..199 CDD:409353 1/3 (33%)
Ig strand E 203..209 CDD:409353 2/10 (20%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353 0/7 (0%)
Ig 242..333 CDD:416386 21/90 (23%)
Ig strand A' 250..253 CDD:409353 1/2 (50%)
Ig strand B 259..266 CDD:409353 1/6 (17%)
Ig strand C 272..277 CDD:409353 1/4 (25%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 1/3 (33%)
Ig strand E 295..305 CDD:409353 3/9 (33%)
Ig strand F 314..322 CDD:409353 2/7 (29%)
Ig strand G 325..334 CDD:409353 2/8 (25%)
PrtgNP_001032740.2 Ig 32..124 CDD:416386 13/61 (21%)
Ig strand A 32..35 CDD:409353
Ig strand A' 38..44 CDD:409353
Ig strand B 48..58 CDD:409353
Ig strand C 62..68 CDD:409353 2/5 (40%)
Ig strand C' 70..73 CDD:409353 0/2 (0%)
Ig strand D 78..83 CDD:409353 1/4 (25%)
Ig strand E 85..91 CDD:409353 0/5 (0%)
Ig strand F 103..110 CDD:409353 1/6 (17%)
Ig strand G 114..124 CDD:409353 2/9 (22%)
Ig 131..218 CDD:416386 14/90 (16%)
Ig strand B 146..150 CDD:409353 1/3 (33%)
Ig strand C 159..163 CDD:409353 1/3 (33%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 2/4 (50%)
Ig strand G 211..214 CDD:409353 1/2 (50%)
Ig_3 230..302 CDD:404760 21/79 (27%)
Ig strand B 247..251 CDD:409353 0/3 (0%)
Ig strand C 260..264 CDD:409353 1/3 (33%)
Ig strand E 282..286 CDD:409353 0/3 (0%)
Ig strand F 296..301 CDD:409353 2/4 (50%)
I-set 322..407 CDD:400151 26/106 (25%)
Ig strand C 352..357 CDD:409353 1/4 (25%)
Ig strand C' 359..362 CDD:409353 0/2 (0%)
Ig strand D 367..371 CDD:409353 1/9 (11%)
Ig strand E 373..378 CDD:409353 2/6 (33%)
Ig strand F 387..394 CDD:409353 2/6 (33%)
Ig strand G 398..407 CDD:409353 1/8 (13%)
FN3 414..507 CDD:238020 2/2 (100%)
FN3 512..605 CDD:238020
fn3 619..694 CDD:394996
FN3 721..809 CDD:238020
FN3 816..906 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 974..1018
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1078..1193
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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