DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and pigrl4.2

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001293038.1 Gene:pigrl4.2 / 105665605 ZFINID:ZDB-GENE-150409-10 Length:240 Species:Danio rerio


Alignment Length:197 Identity:42/197 - (21%)
Similarity:77/197 - (39%) Gaps:32/197 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IPNVTVAVGRDANLPCVVEHLGGYKV---------AWIHIDRQMILTIHRHVISRIPRYSIT-YT 104
            :..|.|..|....:||:.::  .||:         .|:...   ::....|.    .:::|| |.
Zfish    23 LDRVPVIEGETITIPCLYDN--KYKLNKKYWCNGNTWLGCS---VVAYANHT----GKWTITDYP 78

  Fly   105 D-NTWLLHVNQAHQDDRGYYMCQVNTNPMISQVGYLQVVVPPNILDIESTPSSVAVRENQNINMT 168
            | |.:.:.:|.:...|.|:|.|.|..:..:....||.:.| ....|:....|||:..:..::::.
Zfish    79 DHNMFTVTLNNSTSSDSGHYWCAVEIDHHVDNSKYLYLTV-QKAPDVSVLSSSVSGHKGDDVSVR 142

  Fly   169 CRADGFPAPKI-IWRREDGEEIAVEKK------KKVLVYD----ADVLPLTKVSRNEMGAYLCIA 222
            |........|: .|.|.|......|||      ..|.:.|    :..:.:|.:..::.|.|.|..
Zfish   143 CFYRSAYQNKLKQWCRIDDLTCFREKKTDTSQNSSVQISDDGESSFTVLMTGLRLSDSGWYFCSV 207

  Fly   223 TN 224
            .|
Zfish   208 GN 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 22/102 (22%)
Ig 145..238 CDD:416386 19/91 (21%)
Ig strand A 145..149 CDD:409353 0/3 (0%)
Ig strand A' 154..159 CDD:409353 3/4 (75%)
Ig strand B 165..172 CDD:409353 1/6 (17%)
Ig strand C 178..183 CDD:409353 2/5 (40%)
Ig strand C' 185..187 CDD:409353 1/1 (100%)
Ig strand D 195..199 CDD:409353 1/3 (33%)
Ig strand E 203..209 CDD:409353 0/5 (0%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353
Ig 242..333 CDD:416386
Ig strand A' 250..253 CDD:409353
Ig strand B 259..266 CDD:409353
Ig strand C 272..277 CDD:409353
Ig strand C' 281..283 CDD:409353
Ig strand D 289..293 CDD:409353
Ig strand E 295..305 CDD:409353
Ig strand F 314..322 CDD:409353
Ig strand G 325..334 CDD:409353
pigrl4.2NP_001293038.1 IG_like 26..118 CDD:214653 22/100 (22%)
Ig_pIgR 30..117 CDD:143193 20/95 (21%)
Ig 133..217 CDD:299845 15/77 (19%)
IG_like 136..218 CDD:214653 15/74 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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