DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and lrit3b

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:332 Identity:65/332 - (19%)
Similarity:107/332 - (32%) Gaps:117/332 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RQMILTIHRHVISRIP----RY--SITYTDNT--------------WLLHVNQAHQDDRGYYMCQ 126
            |...|.:|.:.::|||    ||  ::||.|.:              ||.  :.::|..|.:.: .
Zfish   161 RLRTLGLHNNRLARIPLLAVRYLRNVTYLDLSSNRLSTLANDLTALWLF--SDSNQTQRSFVL-G 222

  Fly   127 VNTNPMISQVGYLQVVVPPNILDIESTPSSVAVRENQNINMTCRADGFPAPKIIWRREDGEEIAV 191
            :..||.:.....      ..:|||...|.|..|..::  .:||                      
Zfish   223 LQDNPWVC
DCRL------STLLDISRGPESSLVLLDR--FLTC---------------------- 257

  Fly   192 EKKKKVLVYDADVLPLTKVSRNEMGAYLCIATNGVPPSVSKRIILDVEFS----PMIWVPNQLVG 252
                      ::.|.|.                |||       ...||.|    |.:......:.
Zfish   258 ----------SEPLDLA----------------GVP-------FQSVELSRCRRPYVVTSATKIT 289

  Fly   253 APSGTDVTIDCHTEAHPKAIIYWV-------YN-----------SVMVLPSKKYKTDYTENSYRA 299
            |..|:.|.:.|....||...:.|:       ||           .....|.|.:  .|.:.|.|.
Zfish   290 ALLGSTVLLRCEATGHPTPALMWIKSAKRNLYNQGCCKQTQSSLDTERFPKKLF--GYVQESPRV 352

  Fly   300 HMK---LTIRNLQYGDFGNYRCISKNSLGETEG--SIRVYEIPLPSTPSK--QVTHTTVESRENN 357
            .::   :::..:.|.|.|.|||.::|..|.:|.  |:.|..:....|..|  ....||.:|....
Zfish   353 GVRWSVVSLNGISYSDAGEYRCRAQNMAGISEAVVSLNVVGVMAEYTDFKNSDQQQTTTKSDSKR 417

  Fly   358 IIPSSRN 364
            ..|..::
Zfish   418 TKPKQKS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 17/80 (21%)
Ig 145..238 CDD:416386 13/92 (14%)
Ig strand A 145..149 CDD:409353 0/3 (0%)
Ig strand A' 154..159 CDD:409353 2/4 (50%)
Ig strand B 165..172 CDD:409353 2/6 (33%)
Ig strand C 178..183 CDD:409353 0/4 (0%)
Ig strand C' 185..187 CDD:409353 0/1 (0%)
Ig strand D 195..199 CDD:409353 0/3 (0%)
Ig strand E 203..209 CDD:409353 2/5 (40%)
Ig strand F 216..223 CDD:409353 0/6 (0%)
Ig strand G 230..238 CDD:409353 0/7 (0%)
Ig 242..333 CDD:416386 25/113 (22%)
Ig strand A' 250..253 CDD:409353 0/2 (0%)
Ig strand B 259..266 CDD:409353 2/6 (33%)
Ig strand C 272..277 CDD:409353 1/11 (9%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 0/3 (0%)
Ig strand E 295..305 CDD:409353 2/12 (17%)
Ig strand F 314..322 CDD:409353 4/7 (57%)
Ig strand G 325..334 CDD:409353 3/10 (30%)
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470
leucine-rich repeat 69..89 CDD:275380
LRR_8 112..172 CDD:290566 3/10 (30%)
leucine-rich repeat 114..137 CDD:275378
leucine-rich repeat 138..161 CDD:275378 65/332 (20%)
LRR_8 160..214 CDD:290566 13/54 (24%)
LRR_4 160..201 CDD:289563 11/39 (28%)
leucine-rich repeat 162..185 CDD:275378 7/22 (32%)
leucine-rich repeat 186..199 CDD:275378 3/12 (25%)
leucine-rich repeat 215..230 CDD:275378 3/15 (20%)
Ig 278..391 CDD:299845 25/114 (22%)
I-set 279..391 CDD:254352 25/113 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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