DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and lsamp

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:389 Identity:98/389 - (25%)
Similarity:154/389 - (39%) Gaps:71/389 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IMFLIYMTNLVTHVMMDEPRFAQPIPNVTVAVGRDANLPCVVEHLGGYKVAWIHIDRQMILTIHR 90
            ::.|..:..|.|.:.:....|.:...|:||..|..|.|.|.||.... :|||  ::|..|:....
 Frog    14 LLLLRLLCLLPTGLPVRSGDFNRSTDNITVRQGDTAILRCFVEDRSS-RVAW--LNRSGIIFAGD 75

  Fly    91 HVISRIPRYS------ITYTDNTWLLHVNQAHQDDRGYYMCQVNT--NPMISQVGYLQVVVPPNI 147
            ...|..||..      :.|:     |.:.:....|.|.|.|.|.|  :...:|| ||.|.|||.|
 Frog    76 DKWSLDPRVELEKRSLLEYS-----LRIQKVDVSDEGPYTCSVQTKQHTKTTQV-YLIVQVPPKI 134

  Fly   148 LDIESTPSSVAVRENQNINMTCRADGFPAPKIIWR-----------RE-DGEEIAVEKKKKVLVY 200
            .:|.   :.:.|.|..|:.:.|.|.|.|.|.|.||           |: :|||            
 Frog   135 SNIS---ADITVNEGSNVTLMCIAYGRPEPMITWRHLTPTAGTSPARDFEGEE------------ 184

  Fly   201 DADVLPLTKVSRNEMGAYLCIATNGVPPSVSKRIILDVEFSPMIWVPNQLVGAPSGTDVTIDCHT 265
              :.|.:..::|.:.|.|.|.|.|.|..:..|::.:.|.:.|:| ..::...|.:|....:.|..
 Frog   185 --EFLEIQGITREQSGRYECKAANEVASADVKQVRVTVNYPPII-TESKSNEATTGKQAILRCEA 246

  Fly   266 EAHPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKLTIR-----------NLQYGDFGNYRCI 319
            .|.|.....|            ||.|.......:...|.||           |:....:|||.|:
 Frog   247 SAVPAPDFEW------------YKDDTRSRRINSAQGLEIRNTGSRSVLMVANVTEEHYGNYTCV 299

  Fly   320 SKNSLGETEGSIRVYEIPLPSTPSKQVTHTTVESRENNIIPSSRNDTTKSLQTDVGYAMKNDLY 383
            :.|.||.|..|:.:|:...|:.|.......:....:..:.|.:..|:..||...: :.|.|.|:
 Frog   300 AANKLGITNTSLYLYKRVSPTKPMSASERGSNVHYQYKVGPGTPIDSATSLAASL-WLMANLLF 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 30/99 (30%)
Ig 145..238 CDD:416386 27/104 (26%)
Ig strand A 145..149 CDD:409353 2/3 (67%)
Ig strand A' 154..159 CDD:409353 0/4 (0%)
Ig strand B 165..172 CDD:409353 1/6 (17%)
Ig strand C 178..183 CDD:409353 3/15 (20%)
Ig strand C' 185..187 CDD:409353 0/1 (0%)
Ig strand D 195..199 CDD:409353 0/3 (0%)
Ig strand E 203..209 CDD:409353 1/5 (20%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353 1/7 (14%)
Ig 242..333 CDD:416386 24/101 (24%)
Ig strand A' 250..253 CDD:409353 0/2 (0%)
Ig strand B 259..266 CDD:409353 1/6 (17%)
Ig strand C 272..277 CDD:409353 1/4 (25%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 2/3 (67%)
Ig strand E 295..305 CDD:409353 1/9 (11%)
Ig strand F 314..322 CDD:409353 4/7 (57%)
Ig strand G 325..334 CDD:409353 3/8 (38%)
lsampXP_031751462.1 Ig 38..128 CDD:416386 29/98 (30%)
FR1 38..54 CDD:409353 6/15 (40%)
Ig strand A' 39..45 CDD:409353 3/5 (60%)
Ig strand B 47..55 CDD:409353 3/7 (43%)
CDR1 55..59 CDD:409353 2/3 (67%)
FR2 60..67 CDD:409353 3/9 (33%)
Ig strand C 60..66 CDD:409353 3/8 (38%)
CDR2 68..78 CDD:409353 1/9 (11%)
Ig strand C' 70..73 CDD:409353 1/2 (50%)
Ig strand C' 75..78 CDD:409353 0/2 (0%)
FR3 79..114 CDD:409353 9/39 (23%)
Ig strand D 83..90 CDD:409353 1/6 (17%)
Ig strand E 93..99 CDD:409353 2/10 (20%)
Ig strand F 106..114 CDD:409353 3/7 (43%)
CDR3 115..119 CDD:409353 1/3 (33%)
Ig strand G 119..128 CDD:409353 4/9 (44%)
FR4 121..128 CDD:409353 4/7 (57%)
Ig_3 131..206 CDD:404760 25/91 (27%)
Ig strand A' 138..143 CDD:409353 0/7 (0%)
Ig strand B 149..156 CDD:409353 1/6 (17%)
Ig strand C 162..167 CDD:409353 2/4 (50%)
Ig strand C' 173..175 CDD:409353 0/1 (0%)
Ig strand E 185..191 CDD:409353 1/5 (20%)
Ig strand F 198..205 CDD:409353 3/6 (50%)
Ig strand G 212..220 CDD:409353 1/7 (14%)
Ig_3 223..302 CDD:404760 19/91 (21%)
putative Ig strand A 224..230 CDD:409353 2/6 (33%)
Ig strand B 240..244 CDD:409353 0/3 (0%)
Ig strand C 253..257 CDD:409353 1/15 (7%)
Ig strand E 281..285 CDD:409353 0/3 (0%)
Ig strand F 295..300 CDD:409353 3/4 (75%)
Ig strand G 308..311 CDD:409353 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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