DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-delta and vsig10

DIOPT Version :9

Sequence 1:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001093564.2 Gene:vsig10 / 100005564 ZFINID:ZDB-GENE-030131-7476 Length:529 Species:Danio rerio


Alignment Length:352 Identity:85/352 - (24%)
Similarity:123/352 - (34%) Gaps:102/352 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IALNIFPSRFTNRRIMFLIYMTNLVTHVMMDEPRFAQPIPNVTVAVGRDANLPCVVEHLGGYKVA 76
            ::|:|.|:.|.|...:|                          |..|.:.|..|..|......:.
Zfish   123 VSLDISPATFLNNGTLF--------------------------VHKGSNVNFSCSSESNPSQNLT 161

  Fly    77 WIHIDRQMILTIHRHVISRIP-RYSITYTDNTWLLHVNQAHQDDRGYYMCQVNTNPMISQ----- 135
            |. :|........|...|:.| .:|||   |...|        |:|.|.| .:.|.:..:     
Zfish   162 WT-VDNLASDNPEREFGSKSPLAFSIT---NIQPL--------DQGTYTC-TSQNTLSRRTANKT 213

  Fly   136 ----VGYLQVVVPPNILDIESTPSSVAVRENQNINMTCR-ADGFPAPKIIWRREDG--------- 186
                |.|.....|....::...||.|.        ..|. ..|:|.|.:.|:..:|         
Zfish   214 QELLVYYAPERHPECSWELGDKPSDVL--------FICSWFGGYPVPTLTWQEVEGAAEGPTINL 270

  Fly   187 ------EEIAVEKKKKVLVYDADVLPLTKVSRNEMGAYLCIATNGVPPSVSKRIILDVEFSPMIW 245
                  ||:.|...:.:| :|.|.:..|       |.::    .||..|.|        |:..|.
Zfish   271 TTSQQTEELNVSVNRSIL-HDGDKVKCT-------GHHV----TGVEKSCS--------FTLKIP 315

  Fly   246 VP--NQLVGAPSGTDVTIDC-HTEAHPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKLTIRN 307
            .|  ..|..|..||::||.| .|.:.|.|...|..|..::..:.||...  ||  |..:.|||.|
Zfish   316 YPTGQPLATALEGTNITISCTETSSLPPAKTVWKKNDDLIENTSKYIVQ--EN--RPALTLTIVN 376

  Fly   308 LQYGDFGNYRCISKNSLGETEGSIRVY 334
            :...|.|.|.|.|:|.||..|  :.||
Zfish   377 VTKADEGVYYCYSENPLGARE--LEVY 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 22/101 (22%)
Ig 145..238 CDD:416386 21/108 (19%)
Ig strand A 145..149 CDD:409353 0/3 (0%)
Ig strand A' 154..159 CDD:409353 3/4 (75%)
Ig strand B 165..172 CDD:409353 1/7 (14%)
Ig strand C 178..183 CDD:409353 1/4 (25%)
Ig strand C' 185..187 CDD:409353 1/16 (6%)
Ig strand D 195..199 CDD:409353 0/3 (0%)
Ig strand E 203..209 CDD:409353 1/5 (20%)
Ig strand F 216..223 CDD:409353 1/6 (17%)
Ig strand G 230..238 CDD:409353 1/7 (14%)
Ig 242..333 CDD:416386 32/93 (34%)
Ig strand A' 250..253 CDD:409353 1/2 (50%)
Ig strand B 259..266 CDD:409353 3/7 (43%)
Ig strand C 272..277 CDD:409353 1/4 (25%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 0/3 (0%)
Ig strand E 295..305 CDD:409353 3/9 (33%)
Ig strand F 314..322 CDD:409353 4/7 (57%)
Ig strand G 325..334 CDD:409353 2/8 (25%)
vsig10NP_001093564.2 IG_like 28..116 CDD:214653
Ig 32..104 CDD:299845
IG_like 140..204 CDD:214653 19/76 (25%)
IGc2 143..203 CDD:197706 18/72 (25%)
IG_like 324..404 CDD:214653 31/84 (37%)
Ig 328..404 CDD:299845 30/80 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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