DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34447 and Liph

DIOPT Version :9

Sequence 1:NP_001097060.1 Gene:CG34447 / 5740813 FlyBaseID:FBgn0085476 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_038944552.1 Gene:Liph / 681694 RGDID:1592849 Length:476 Species:Rattus norvegicus


Alignment Length:348 Identity:96/348 - (27%)
Similarity:143/348 - (41%) Gaps:87/348 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LIHGY--TGDRDFAPNSYIRPV---LLDHEDVYVISIDY---GPLVRYPCYIQAVQNLPLVSRCL 133
            :|||:  ||    :|..::..:   |:..:::.|:.:|:   ...|.||       :....:|.:
  Rat   111 IIHGFRPTG----SPPVWMEELVQSLISVQEMNVVVVDWNRGATTVIYP-------HASSKTRKV 164

  Fly   134 AQLINNLVDRAIVAN---DQIHLIGFSLGGQVAGQTANYVKRKMKRITGLDPAKPLFILGPDSRR 195
            |.::...:|:.:...   |.|::||.|||..:||........|:.||||||||.|||...|...|
  Rat   165 ALILKEFIDQMLAKGASLDNIYMIGVSLGAHIAGFVGEMYSGKLGRITGLDPAGPLFNGRPPEDR 229

  Fly   196 LDKGDADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSS---------CNHER 251
            ||..||.||||||:|....||..|.||:|||||.|..||||       |.:         |:|:.
  Rat   230 LDPSDAQFVDVIHSDTDALGYREALGHIDFYPNGGLDQPGC-------PKTIFGGIKYFKCDHQM 287

  Fly   252 APRFYAESINTTVGFWARQCSGWLLQLLTLCPTTGAQAL-----LGYHVS---------DELRGS 302
            :...|..|:.......|..|..:.......|.:.||..:     |||:..         |.....
  Rat   288 SVFLYLASLQNNCSITAYPCDSYRDYRNGKCVSCGAGHIVSCPSLGYYADNWREYLWDRDPPMTK 352

  Fly   303 YFLQTASKSPYALG--------------------KMQDVDNRQTLAKFHLNFDHNEIDDDYEPQL 347
            .|..||...||.:.                    |::..|...|.:|.           |:||  
  Rat   353 AFFDTAETKPYCIYHYFVDIISWNKSVRRGFITIKLRGEDGNITESKI-----------DHEP-- 404

  Fly   348 LEAFLELEAVKVVVKMDESELDK 370
             .||.:...|.::.:.:. :|||
  Rat   405 -SAFQKYHQVSLLARFNR-DLDK 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34447NP_001097060.1 Pancreat_lipase_like 41..309 CDD:238363 80/265 (30%)
LiphXP_038944552.1 Pancreat_lipase_like 78..347 CDD:238363 77/253 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.