DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34297 and Ttc1

DIOPT Version :10

Sequence 1:NP_001097696.1 Gene:CG34297 / 5740802 FlyBaseID:FBgn0085326 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_650543.1 Gene:Ttc1 / 41993 FlyBaseID:FBgn0038428 Length:263 Species:Drosophila melanogaster


Alignment Length:254 Identity:60/254 - (23%)
Similarity:100/254 - (39%) Gaps:69/254 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HPQIDECFLDSEST--------VEEVVRLLENLQVPNEEE--AEGQEKPKRSLKSSTITEESFII 60
            |..|.|...:.|:|        |:|:|.....|.:.:|.|  |.|.:    |:.:.|..:....|
  Fly    12 HDAIGEEITEKEATSTRQSEKDVDEIVEKQNQLALDDEAEQGAAGGD----SIATPTTVDSELTI 72

  Fly    61 TERKTPIPVISAPTSSKEKSKPRTFNRIDRSKDRFPFMRQVEMDLDQRSKARLERERVAQNFRKL 125
            .|.:                        :|.||..|  .|:..:.::..|.::|           
  Fly    73 EELR------------------------EREKDLSP--EQLTANKEKADKLKVE----------- 100

  Fly   126 GNAEYRKGNYEAAMKVYTEAIE-----NIRDSHILYINRALCFIKSGKFKRGIVDCDFVLNKLDE 185
            ||..::..:.|.|.|.||||::     :.::..:||.|||...||....|..|.||...: :|..
  Fly   101 GNELFKNDDAEGAAKTYTEALDICPSASSKERAVLYGNRAAAKIKLEANKAAIDDCTKAI-ELWP 164

  Fly   186 KNLRAWMYRAMAYKGLN--DESNFENCVKY---------ARKFNSKQMDFIDDFLEKLK 233
            :.:|..:.||..|:..:  ||: .|:..|.         ||:...:....|::..||||
  Fly   165 EYVRVLLRRAKLYEQEDKPDEA-LEDYKKVTEIDPGQQEAREAQIRLPPIINERNEKLK 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34297NP_001097696.1 NlpI <104..>203 CDD:443815 27/105 (26%)
TPR repeat 119..147 CDD:276809 9/27 (33%)
TPR repeat 152..183 CDD:276809 11/30 (37%)
TPR repeat 188..216 CDD:276809 9/38 (24%)
Ttc1NP_650543.1 3a0801s09 16..>232 CDD:273380 58/250 (23%)
TPR repeat 94..122 CDD:276809 11/38 (29%)
TPR repeat 132..162 CDD:276809 11/30 (37%)
TPR repeat 167..195 CDD:276809 8/28 (29%)

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