Protein Alignment Rpb12 and AT1G53690

DIOPT Version :9

• Sequence 1: NP_001097319.1
• Gene: Rpb12 / 5740790
• FlyBaseID: FBgn0262954
• Length: 57
• Species: Drosophila melanogaster
• Sequence 2: NP_001319215.1
• Gene: AT1G53690 / 841806
• AraportID: AT1G53690
• Length: 60
• Species: Arabidopsis thaliana
• Alignment Length: 46
• Identity: 21/46 - (45%)
• Similarity: 31/46 - (67%)
• Gaps: 1/46 - (2%)

  Fly     2 SETSSKDNVKTAMTYICGECHHENEMRPRDPIRCRECGYRIMYKKR 47
            |||..| ..:..:.|:||:|..||.::..|..:||:||:||:||||
plant     6 SETDDK-QPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKR 50

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb12	NP_001097319.1	RPOLCX	14..57	CDD:128906	17/34 (50%)
AT1G53690	NP_001319215.1	RPOLCX	17..59	CDD:128906	17/34 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	54	1.000	Domainoid score	I4169
eggNOG	1	0.900	-	-		E1_COG1996
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1620152at2759
OrthoFinder	1	1.000	-	-		FOG0004951
OrthoInspector	1	1.000	-	-		otm3026
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR12056
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3493
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.880