Protein Alignment Rpb12 and polr2k

DIOPT Version :9

• Sequence 1: NP_001097319.1
• Gene: Rpb12 / 5740790
• FlyBaseID: FBgn0262954
• Length: 57
• Species: Drosophila melanogaster
• Sequence 2: NP_001016509.1
• Gene: polr2k / 549263
• XenbaseID: XB-GENE-854169
• Length: 58
• Species: Xenopus tropicalis
• Alignment Length: 44
• Identity: 39/44 - (88%)
• Similarity: 41/44 - (93%)
• Gaps: 0/44 - (0%)

  Fly    14 MTYICGECHHENEMRPRDPIRCRECGYRIMYKKRTKRLVVFDAR 57
            |.|||||||.|||::.||||||||||||||||||||||||||||
 Frog    15 MIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR 58

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb12	NP_001097319.1	RPOLCX	14..57	CDD:128906	37/42 (88%)
polr2k	NP_001016509.1	RPOLCX	15..58	CDD:128906	37/42 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	69	1.000	Domainoid score	I9534
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	89	1.000	Inparanoid score	I4975
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1620152at2759
OrthoFinder	1	1.000	-	-		FOG0004951
OrthoInspector	1	1.000	-	-		oto103135
Panther	1	1.100	-	-	LDO	PTHR12056
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1178
SonicParanoid	1	1.000	-	-		X3493
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.190