DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34313 and AT1G80060

DIOPT Version :9

Sequence 1:NP_001097169.1 Gene:CG34313 / 5740766 FlyBaseID:FBgn0085342 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001319424.1 Gene:AT1G80060 / 844346 AraportID:AT1G80060 Length:243 Species:Arabidopsis thaliana


Alignment Length:81 Identity:20/81 - (24%)
Similarity:33/81 - (40%) Gaps:18/81 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 VAVASSTGELVHSAQR-------NGHDHRAFVSWRFLWRCFGLLNVDTNQPIDDQR-SSGRATLK 256
            ||...|..||..:.::       .||   ..:||..:|..|.|.       ..||| .:.:.:::
plant    69 VAKDCSVAELKRAVEQVFTISPLEGH---GMISWSHVWGHFCLC-------YRDQRLVNDKTSIR 123

  Fly   257 ELGIENAATLKFVHRV 272
            .||:.:...|.||..:
plant   124 YLGLNDGDQLHFVRHL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34313NP_001097169.1 None
AT1G80060NP_001319424.1 Ubl_SNRNP25 53..138 CDD:340578 20/78 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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