DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34445 and Litaf

DIOPT Version :10

Sequence 1:NP_001097420.1 Gene:CG34445 / 5740761 FlyBaseID:FBgn0085474 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_064364.1 Gene:Litaf / 56722 MGIID:1929512 Length:161 Species:Mus musculus


Alignment Length:75 Identity:24/75 - (32%)
Similarity:31/75 - (41%) Gaps:16/75 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PVEIECPACG---IKDLSVVQNDLKWWASE----LNRIVGCLFVTFCCCCCFNYYVPCKQTDRSH 108
            ||::.||:|.   :..||.....|.|.:..    |..:.||.|:.||        |...| |..|
Mouse    91 PVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFC--------VDALQ-DVDH 146

  Fly   109 YCGNCGCYFG 118
            ||.||....|
Mouse   147 YCPNCKALLG 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34445NP_001097420.1 zf-LITAF-like 49..119 CDD:463165 24/75 (32%)
LitafNP_064364.1 PPxY motif 20..23
zf-LITAF-like 89..159 CDD:463165 24/75 (32%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 111..134 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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