DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34445 and litaf

DIOPT Version :10

Sequence 1:NP_001097420.1 Gene:CG34445 / 5740761 FlyBaseID:FBgn0085474 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_988970.1 Gene:litaf / 394567 XenbaseID:XB-GENE-1017030 Length:148 Species:Xenopus tropicalis


Alignment Length:130 Identity:31/130 - (23%)
Similarity:44/130 - (33%) Gaps:48/130 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPEKEAETQQEIREREAKALEDRKERKIYENFATPLAGTFLNLPREPVEIECPACGIKDLSVVQN 69
            :|.:...|.|.:..::|..|.||                       ||::.|.:|.    |::..
 Frog    55 VPMQPPVTVQTVYVQQAMTLYDR-----------------------PVQMCCRSCN----SMITT 92

  Fly    70 DLKW------WAS-----ELNRIVGCLFVTFCCCCCFNYYVPCKQTDRSHYCGNCGCYFGRSMKR 123
            .|::      |.|     .|..|.||..:.||.         ....|..|||.||....| |.||
 Frog    93 RLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCI---------DSLKDVDHYCPNCHALLG-SYKR 147

  Fly   124  123
             Frog   148  147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34445NP_001097420.1 zf-LITAF-like 49..119 CDD:463165 20/80 (25%)
litafNP_988970.1 PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 20..23
zf-LITAF-like 76..146 CDD:463165 24/106 (23%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 101..123 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.