DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)41Ab and LOC101731483

DIOPT Version :9

Sequence 1:NP_001104357.1 Gene:l(2)41Ab / 5740691 FlyBaseID:FBgn0262123 Length:890 Species:Drosophila melanogaster
Sequence 2:XP_031750353.1 Gene:LOC101731483 / 101731483 -ID:- Length:1012 Species:Xenopus tropicalis


Alignment Length:924 Identity:225/924 - (24%)
Similarity:426/924 - (46%) Gaps:105/924 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DCDFPISFEPNPEASPEPE-------ELALLPPNHPLLSKFQVCLKGHLIRTKREIENEIAEIKH 65
            |.|.|:..|...|...|.:       ||.:|.|:|||:.:||..||.:|.:..:.::.|:.|:..
 Frog   116 DSDDPVGEEETAEEEEEKKEYDDKESELVVLDPDHPLMGRFQTALKTYLTKQIKSLDLELREMTE 180

  Fly    66 HVKLREQRREEQGLTLYDMQQKM-KFQEKQIMELSAVIEKH----LKNRQ-DEEFNT------KT 118
            .:|..::.||:.|:.||.:||:: :.|    |.|....:||    ::.|| ::|..|      ||
 Frog   181 SMKNNKKEREDLGMFLYGVQQELARLQ----MGLEKQHDKHSHVSVQRRQKEDELETIRNLYKKT 241

  Fly   119 LKAENEEKIKLTKSQKTLYHERMA-ELGDMQSLGSNIKKWACSVEDEVKNAKRIVSRDAQLQDQL 182
            .:..:.|:.|::..|..:  |.:| .|..|:::..:::       .::...||.|.:....:.|.
 Frog   242 HQITDTERKKVSSMQTEV--ENLALRLFYMENMNRDVR-------SDINVMKRAVQKAEMERLQA 297

  Fly   183 SQEKRKSDILFYRLDIEIKKRENELLSICEEEATMKEVINILNMSIANANTDLEVLQNEHKRLTQ 247
            ..||:|.||...||..|:.:...::.....:.:..:|.......::|.|..::|.:..|.|:|.|
 Frog   298 EVEKKKQDIFVDRLTCEVDRLREQIALYEAQVSAQREDTKAARETVAEACMEIEAIAVEKKQLIQ 362

  Fly   248 AWNEVIIAIQLRDKILFQVQDAARKHREAMKHNIAGIEAIKKQIGKEMELNKKLDSFKQRLADET 312
            .||..:|.:..||:....:|:|....::.:....|.||..||.|.||.|.|::|:....|...:.
 Frog   363 QWNSSLIGMTRRDEAYAAIQEAFSLAQQELLSIDAEIEGCKKTITKEEERNEQLNFMLNRAESDA 427

  Fly   313 SSLRRECQDESESLLKMQA---KLDDLPEFLNTTETDLQDALREGSHLFTEVRKLDIALDKYLTQ 374
            :..:::.   ::||.|.:|   :.......|..||..:.....|.|....|:..:...::|....
 Frog   428 AMSKKQV---AQSLTKQEALRLEFSTYARTLQETEQAINRVAVERSGYVNEITAMQKKIEKESQV 489

  Fly   375 KFRTEETILRLAQDHLITDKATAYRLKLLGKSQEKRRNVDLSLSKVQNQLSLSMLEV----EKLR 435
            |...|..||...|:.:.:|||..|...|..|.|::...::::.|||:|:.:...||:    .:::
 Frog   490 KVNLEAQILAKLQEKMTSDKAAKYSSLLAAKLQKQTLELEINCSKVENETAQISLEINHSLSRMK 554

  Fly   436 CVVFNERAYNDSTKTKLKSAENKSSTLENGLKKIHIQIEIKMKLYEKINCKIEEMDHLFGDASGN 500
            .:   ::...|..| .::...:..|..:|.:.|..:.||.|.......:.:||......|.....
 Frog   555 AL---QKTLVDLDK-NIEDTNDLISQSQNEITKRTLAIERKQATINLFSKQIEATIAQTGGKEVG 615

  Fly   501 PTDLKIKQLEKSIHIGELQVREHQQFWIMLQNHFVNLSQKRNDQLNEIQVTRKQLSIIRQKSLKS 565
            |.:::|..|.|.|.....::...||:|:.||...|||:::|.:|...:::.|::|:|::||.:::
 Frog   616 PLEIQITALTKQIDECNSEIMSLQQYWLRLQTEMVNLTKQREEQDASVEMLRRELTILQQKKIRT 680

  Fly   566 DQELEISHRKAKELQIFIKKFTSKLELLNDKIYKK-------RIHHDVEETEFDHEQAEQTQKLK 623
            :.|:|....:.|:::..::...:.:..||..:.|.       :.::.:.|:||       .:.|:
 Frog   681 ENEIEQEKNEQKDIEHHMRNLKNDMVRLNMLLSKNSSTKEQLQQNNQLMESEF-------MRSLR 738

  Fly   624 IAELEILKLEGKIVELQNEIE--LHKDYVIDKHRETLSWETKYKMIEETIKWAKLERSVKGEIG- 685
            .||.|.::::..:..||.|.|  ||.  :::...:.:.||.|.::.:|      :..:|..||| 
 Frog   739 EAERESIEMQENLRNLQEEKERILHS--LVETEHQIMLWEKKIQLAKE------MRNAVDSEIGQ 795

  Fly   686 ----LMKTEIHRMNIRYSQLKRAQESLVLDLEHCVMHREQIF---VNASVKEHLQAKFKQLKNTS 743
                .||.|||||.||:|||.:.||.::.|:|..|..||.|.   ...|.|...|......:...
 Frog   796 GDIQAMKAEIHRMQIRHSQLMKQQEKMICDMEAVVSRRETIARRGQGQSEKNKKQLTVSDFRRKL 860

  Fly   744 Q-IQVRLDEVHNRTKLISNEITFLSEKQLIDDINKIERMIYMLRRIQSDLNDIIKEDANIQDRIE 807
            | ::.::.|:...|:..::.|..|.:.|        |.:...:...|.:::.:.::.::....||
 Frog   861 QDLRKKIKEIQKNTEECTDTIADLEDTQ--------ESLTAAIAEKQHNISTMKQDFSSTAAEIE 917

  Fly   808 EGILAKHANLEQIIRKQMRAK--------AYKRL----NTLKSQQVILRSEL-----TVQQLSQK 855
            :....|..||.||:..|.|.|        .||.|    ..|:::|....|.:     .:.|:.|:
 Frog   918 QLQEKKRQNLLQIVSYQTRLKHLQAVKDGKYKPLCSTWQVLEAEQHKQESRIHTISTIIHQIQQE 982

  Fly   856 QSELNYDLTEIAKA 869
            ..:...||..|:.|
 Frog   983 YPQFQSDLHSISLA 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)41AbNP_001104357.1 Smc 53..808 CDD:224117 186/792 (23%)
LOC101731483XP_031750353.1 Smc <164..876 CDD:224117 181/746 (24%)
BRE1 645..743 CDD:400809 24/104 (23%)
EnvC 857..>926 CDD:227278 11/76 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164743at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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