DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS28-like and rps2801

DIOPT Version :9

Sequence 1:NP_001097132.1 Gene:RpS28-like / 5740688 FlyBaseID:FBgn0085211 Length:76 Species:Drosophila melanogaster
Sequence 2:NP_594526.1 Gene:rps2801 / 2542751 PomBaseID:SPAC25G10.06 Length:68 Species:Schizosaccharomyces pombe


Alignment Length:51 Identity:24/51 - (47%)
Similarity:35/51 - (68%) Gaps:0/51 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDIVDFEDTE 59
            |:|||:|.|.|:||.:|:|||:.:|......:|.||||||..||:...::|
pombe    11 AKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVREDDILVLLESE 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS28-likeNP_001097132.1 S1_like 9..59 CDD:299122 23/49 (47%)
rps2801NP_594526.1 S1_S28E 9..68 CDD:239904 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10769
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.970

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