DRSC/TRiP Functional Genomics Resources

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Protein Alignment dcma and rgs7bpa

DIOPT Version :10

Sequence 1:NP_001260044.1 Gene:dcma / 5740672 FlyBaseID:FBgn0085380 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001070076.1 Gene:rgs7bpa / 767669 ZFINID:ZDB-GENE-060929-380 Length:248 Species:Danio rerio


Alignment Length:229 Identity:56/229 - (24%)
Similarity:107/229 - (46%) Gaps:34/229 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RGSTAVELDKITNLNTLIVEINSHVALFRDMLIHVGQ-AKDCPELREKIRKLRRTCVEALKHTAQ 77
            |..::..|..:::...::.|.|:.|||:|:::|.:|: :.|||.||.::.|.|....|..:...|
Zfish    32 RRESSEALRAVSDCRMVVQEFNTLVALYRELVISIGEISADCPSLRAEMHKTRTKGCEMARTAHQ 96

  Fly    78 ILMPQVKSAMADGILTDNPHLVLLFYMAQ----LFLRELVKSYRLIQVVPMDMSGYYENRAGPSN 138
            .|  ...|...||.:  :|.:..||...|    ::|.|::||..|:..:.:...|  ::..|.:.
Zfish    97 NL--SAISGPEDGEI--HPEICRLFIQLQCCLEMYLTEMLKSVCLLGSLQLHRKG--KHYLGATK 155

  Fly   139 LGN---VISQILLCKQFT---PD------FNEEELCSITKDSQDIAVLLAEMQEYMPQHEAYLER 191
            |.:   ..|.|.:.:..:   ||      ....::.:|.:|..::..||::::|.||. ....:.
Zfish   156 LDSRKEDSSDIPILEDTSSTPPDCPHTYFLVATDIENIERDMTEMKNLLSKLRETMPL-PLKNQD 219

  Fly   192 NAALDTTGPW----QAKRRQNYICKNMSLLCCVS 221
            :::|....|:    |.|||...:|      |.||
Zfish   220 DSSLLNLAPYPMVRQRKRRFFGLC------CLVS 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcmaNP_001260044.1 Syntaxin_2 27..>77 CDD:464199 16/50 (32%)
C_NRPS-like <38..123 CDD:394795 28/89 (31%)
rgs7bpaNP_001070076.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 56/229 (24%)

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