DRSC/TRiP Functional Genomics Resources

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Protein Alignment dcma and rsbp-1

DIOPT Version :10

Sequence 1:NP_001260044.1 Gene:dcma / 5740672 FlyBaseID:FBgn0085380 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_492439.1 Gene:rsbp-1 / 172729 WormBaseID:WBGene00011531 Length:171 Species:Caenorhabditis elegans


Alignment Length:63 Identity:18/63 - (28%)
Similarity:35/63 - (55%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LNTLIVEINSHVALFRDMLIHVGQAKDCPELREKIRKLRRTCVEALKHTAQILMPQVKSAMAD 89
            :..|:.|.|..:||||.....:|.|:|...||.::....|.|.:|::....:::||:::..|:
 Worm    12 IQELVHECNVQLALFRVATQGIGTAQDGASLRREVETAGRACQKAVEAANNVVLPQLRADEAE 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcmaNP_001260044.1 Syntaxin_2 27..>77 CDD:464199 15/49 (31%)
C_NRPS-like <38..123 CDD:394795 15/52 (29%)
rsbp-1NP_492439.1 None

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