DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34347 and frmd3

DIOPT Version :10

Sequence 1:NP_001368952.1 Gene:CG34347 / 5740668 FlyBaseID:FBgn0085376 Length:1519 Species:Drosophila melanogaster
Sequence 2:NP_001072510.1 Gene:frmd3 / 779965 XenbaseID:XB-GENE-1011845 Length:585 Species:Xenopus tropicalis


Alignment Length:481 Identity:157/481 - (32%)
Similarity:232/481 - (48%) Gaps:77/481 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MSVRINLLDETEFIHEIKDDLPGQALLDVVFARLNLIETSYFGIRYIDEENQTHWLDPASRISRQ 75
            |...|.|||:||....|:.|..||.|||.:....||:|..|||||::|.|.|.|||||:..:::|
 Frog    16 MRCTIRLLDDTEISFNIQRDTKGQFLLDYICNHYNLLEKDYFGIRFVDPEKQRHWLDPSKPVAKQ 80

  Fly    76 LKPKSDPYDLYFGVKFYAADPCKLLEEITRYQLFLQVKQDVLQGRLPVAFELAAELGAFVVQSEL 140
            :| ...||.:.|.||||..:|.|:.||:|||.|:||:|:|:..|||...|..||.|||.:||:|:
 Frog    81 MK-SHPPYTMCFRVKFYPHEPLKIKEELTRYLLYLQIKRDIFHGRLLCCFADAAFLGACIVQAEI 144

  Fly   141 GDYDQRRHSKGYVSEFRLLPNQSNELETRVSELHQ-QLKGMSPSSAELNYLDKVKWHDMYGVDLH 204
            ||||...|...|:.:|::.|.||.:||.::.|:|: :|:|.|||.:|.|.|.|....:.||||.|
 Frog   145 GDYDPDEHPDNYICDFKIFPKQSQKLERKIVEIHKNELRGQSPSVSEFNLLLKAHSLETYGVDPH 209

  Fly   205 PVLGEDSVEYFLGLTPSGIVVLRNKTTVAHYYWPRIAKVYYKGRYFMLRISDKNNE-LSTYGFET 268
            |.........|||.|.:|.||.:....:....||.|.|:.:.|:.|.:.:..|..: :.||...|
 Frog   210 PCKDSTGTTTFLGYTAAGFVVFQGNKRIHLIKWPDICKMKFDGKTFHVVVMQKEKKNILTYHTST 274

  Fly   269 PRKSACKHLWRCCVEHHAFFRQVRVAPLPSSQSHAADLFQLGSRFRH-SRPDKQTEKDALSAGRS 332
            |  :||||||:|.||:.||::..:.:.:.:..|  :::|..|||||: .:..|:..:.:....|.
 Frog   275 P--AACKHLWKCGVENQAFYKYAKSSQVKTVTS--SNIFFKGSRFRYCGKVAKEVVEASSKIQRD 335

  Fly   333 PPAFTRT--PSKRQPRRVIDDFFNSNGNGNGNGNGNGNGHGHGGSGAGTLGGGSHMGNRPL---- 391
            ||...|:  |..|                                       .|:..|:.|    
 Frog   336 PPEVHRSLIPHSR---------------------------------------SSYSLNKQLIINM 361

  Fly   392 -------PQPGMGTISNNYDSPYRSTYSIPTSLGIRPCHQQQNNNSSSYNNNSGGNLQTP----- 444
                   |.|      |..:........|..  ||....|.:.:::....|:....|:|.     
 Frog   362 EPLQPLIPSP------NEEEEEEEEENQIDE--GILLLQQSEASSAPVLGNSPARGLETTADVTH 418

  Fly   445 DSPRSTRSAPWPRSQQRSLFGHNPSS 470
            |...|.|..|...|:|    .:|||:
 Frog   419 DEEESIREEPLTISEQ----VYNPSA 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34347NP_001368952.1 B41 13..204 CDD:214604 89/191 (47%)
FERM_C_NBL4_NBL5 200..289 CDD:270007 34/89 (38%)
FA 305..347 CDD:462582 13/44 (30%)
RSRP 596..>694 CDD:293674
frmd3NP_001072510.1 FERM_F1_FRMD3 16..96 CDD:340622 37/80 (46%)
FERM_M 100..209 CDD:459788 51/108 (47%)
FERM_C_FRMD3_FRMD5 190..293 CDD:270013 39/104 (38%)
FA 307..352 CDD:462582 14/83 (17%)
Blue background indicates that the domain is not in the aligned region.

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