DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34347 and FARP1

DIOPT Version :10

Sequence 1:NP_001368952.1 Gene:CG34347 / 5740668 FlyBaseID:FBgn0085376 Length:1519 Species:Drosophila melanogaster
Sequence 2:NP_001273768.1 Gene:FARP1 / 10160 HGNCID:3591 Length:1076 Species:Homo sapiens


Alignment Length:505 Identity:146/505 - (28%)
Similarity:227/505 - (44%) Gaps:90/505 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PS-RIMSVRINLLDETEFIHEIKDDLPGQALLDVVFARLNLIETSYFGIRYIDEENQTHWLDPAS 70
            || :::|::|.:||:|:...|:....||:.|||.|...|||:|..|||:.:.|.:..|.|||...
Human    35 PSGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLK 99

  Fly    71 RISRQL-KPKSDPYDLYFGVKFYAADPCKLLEEITRYQLFLQVKQDVLQGRLPVAFELAAELGAF 134
            .|.:|: :||.  ..:.|.|||:..|..:|.||:|||...||||||:.||||......||.|.:.
Human   100 PIVKQIRRPKH--VVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLISH 162

  Fly   135 VVQSELGDYDQ---RRHSKGYVSEFRLLPNQSNELETRVSELHQQLKGMSPSSAELNYLDKVKWH 196
            :||||:||:|:   |.|    :::.:.:| |.:.||.::.|.|....|.:|:.::...|:..:..
Human   163 IVQSEIGDFDEALDREH----LAKNKYIP-QQDALEDKIVEFHHNHIGQTPAESDFQLLEIARRL 222

  Fly   197 DMYGVDLHPVLGEDSVEYFLGLTPSGIVVLRNKTTVAHYYWPRIAKVYYKGRYFMLRISDKNNEL 261
            :|||:.|||....:..:..|.:..:||:|.:..|.:..:.|.::.|:.:|.:.|::::....|..
Human   223 EMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRFLIKLRPDANSA 287

  Fly   262 --STYGFETPRKSACKHLWRCCVEHHAFFR---QVRVAPLPSSQSHAADLFQLGSRFRHS-RPDK 320
              .|..|....:..||..|:.|||||||||   :.:..|.|.       ||..||.||.| |..|
Human   288 YQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPV-------LFSRGSSFRFSGRTQK 345

  Fly   321 QTEKDALSAGRSPPAFTRTPSK--------RQP----RRVIDDFFNSNGNGNGNGNGNGNGH--- 370
            |........|.....|.|..||        .||    ..|::....|.....|.|..:..|.   
Human   346 QVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQSTSLTFGEGAESPGGQSCR 410

  Fly   371 ---------GHGGSGAGTLGGGSHMGNRPL--------------------------PQPGMGTIS 400
                     |..||........|..||:..                          |||..|:::
Human   411 RGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEEEEEVVKDRTQQSKPQPPQPSTGSLT 475

  Fly   401 NNYDSPYRSTYSIPTSLGIRPCHQQQNNNSSSYNNNSGGNLQTPDSPRST 450
            .   ||:.|..|:.:..|:.|.:...:.|.|            ||:.:::
Human   476 G---SPHLSELSVNSQGGVAPANVTLSPNLS------------PDTKQAS 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34347NP_001368952.1 B41 13..204 CDD:214604 72/194 (37%)
FERM_C_NBL4_NBL5 200..289 CDD:270007 26/90 (29%)
FA 305..347 CDD:462582 17/54 (31%)
RSRP 596..>694 CDD:293674
FARP1NP_001273768.1 B41 42..230 CDD:214604 72/194 (37%)
FERM_C_FARP1-like 217..337 CDD:270014 36/126 (29%)
FA 329..372 CDD:462582 15/49 (31%)
RhoGEF 542..728 CDD:238091
PH1_FARP1-like 789..892 CDD:269928
PH2_FARP1-like 962..1059 CDD:270055
Blue background indicates that the domain is not in the aligned region.

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