Protein Alignment nvd and CH1

DIOPT Version :10

• Sequence 1: NP_001097670.1
• Gene: nvd / 5740633
• FlyBaseID: FBgn0287185
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_175088.1
• Gene: CH1 / 841029
• AraportID: AT1G44446
• Length: 536
• Species: Arabidopsis thaliana
• Alignment Length: 359
• Identity: 83/359 - (23%)
• Similarity: 134/359 - (37%)
• Gaps: 104/359 - (28%)

  Fly    91 PPY----PNGWYGILKSSQLKAGEATCVSCLGEDLVIFRSKKDIVFILDAYCPHLGANLGIGGSV 151
            |||    .|.||.:..::.||......:.|..:..||||.:......:...|.|....|.: |:|
plant   211 PPYSPHLKNFWYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDL-GTV 274

  Fly   152 ADDCVICPFHQWKFRGTDGLCINIPYSTSVPKGSKLKKWISQEVDGFIFIW-------------- 202
            .:..:.||:|.|:: .|||.|..:| ||.:.| .|:|.....|.:|.|:||
plant   275 NEGRIQCPYHGWEY-STDGECKKMP-STKLLK-VKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQ 336

  Fly   203 ------YHAEQTELPWDLPVPMGEIDDTFVYHGHNEFYINCHIQEIPENGADIAHFNAIHKKNFI 261
                  .||   ||..||||..|.:.|                     |..|:||....|...|.
plant   337 PPSGFLIHA---ELVMDLPVEHGLLLD---------------------NLLDLAHAPFTHTSTFA 377

  Fly   262 NGSWAQKKRL-FGLGSHHWKARWSPFTGKLKY------LAEVNLSHTFKLFGKFGCFRMEVSGKQ 319
            .| |:....: |...:...:..|.|:...:::      |:.:.:|...||.||        |.:|
plant   378 KG-WSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISKPGKLEGK--------STQQ 433

  Fly   320 IGPSI----VCLEVNSYTFGKIKVFQYITPIEPMLQKVVHEFYGPRWIAPLMKIFIYGESLMFER 380
            ....:    |||..:.   .|.:          :|.::..:|      ||::|...:.|.|
plant   434 CATHLHQLHVCLPSSK---NKTR----------LLYRMSLDF------APILKNLPFMEHL---- 475

  Fly   381 DIKIWNH---KVFNRN--PILAKEDASIKKFRLW 409
                |.|   :|.|.:  .:|.:::..:....:|
plant   476 ----WRHFAEQVLNEDLRLVLGQQERMLNGANIW 505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nvd	NP_001097670.1	PobA	84..413	CDD:444459	83/359 (23%)
CH1	NP_175088.1	PLN02281	1..536	CDD:177920	83/359 (23%)