DRSC/TRiP Functional Genomics Resources

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Protein Alignment nvd and Rfesd

DIOPT Version :10

Sequence 1:NP_001097670.1 Gene:nvd / 5740633 FlyBaseID:FBgn0287185 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_849247.3 Gene:Rfesd / 218341 MGIID:2145198 Length:157 Species:Mus musculus


Alignment Length:131 Identity:32/131 - (24%)
Similarity:52/131 - (39%) Gaps:33/131 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 DLVIFRSKKDIVFILDAYCPHLGANLGIGGSVAD----DCVICPFHQWKFRGTDGLCINIPYSTS 180
            ::|||..|.: ...:|..|.|.|..|.: |.:.|    .|::||:|::|.....|..:   |.:.
Mouse    40 EVVIFYHKGE-YHAMDIRCYHSGGPLHL-GEIEDFNGQSCIVCPWHKYKITLATGEGL---YQSI 99

  Fly   181 VPKGSKLK-KWISQEV----------DGFIFIWYHAEQTELPWDLPVPMGEIDDTFVYHGHNEFY 234
            .||....| ||.|:.|          :|.|::....|..:...|             |:...||.
Mouse   100 NPKDPSAKPKWCSKGVKQRIHTVKVDNGNIYVTLSKEPFKCDSD-------------YYATGEFK 151

  Fly   235 I 235
            :
Mouse   152 V 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nvdNP_001097670.1 PobA 84..413 CDD:444459 32/131 (24%)
RfesdNP_849247.3 NirD 16..134 CDD:441749 27/98 (28%)

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