DRSC/TRiP Functional Genomics Resources

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Protein Alignment nvd and XB5992703

DIOPT Version :9

Sequence 1:NP_001097670.1 Gene:nvd / 5740633 FlyBaseID:FBgn0287185 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001135588.1 Gene:XB5992703 / 100216141 XenbaseID:XB-GENE-5992704 Length:455 Species:Xenopus tropicalis


Alignment Length:404 Identity:161/404 - (39%)
Similarity:227/404 - (56%) Gaps:15/404 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WIFFVP----LEWKKDLDNEKWSFLRKTENVVCYNHK----RDTINRLRKLKIQKIIELPPPYPN 95
            |:..:|    |.|...|.:.....||..|.|.....|    ..|.|::|:.:.:.  :|||.|||
 Frog    54 WLLLLPVAALLLWGWRLLSRPLEMLRSPEEVGYIPEKGRSRAQTANQVRRRRRKG--DLPPVYPN 116

  Fly    96 GWYGILKSSQLKAGEATCVSCLGEDLVIFRSKKDIVFILDAYCPHLGANLGIGGSVADDCVICPF 160
            |||..|.|..|..|.....:.|||.|.::|:.:..|::::||||||||||.:||.|..||:.|||
 Frog   117 GWYRALDSHLLPPGAVQDCTLLGEQLAVYRTLEGKVYVVEAYCPHLGANLAVGGKVVGDCIECPF 181

  Fly   161 HQWKFRGTDGLCINIPYSTSVPKGSKLKKWISQEVDGFIFIWYHAEQTELPWDLPVPMGEIDDTF 225
            |.|:|.|.||.|..|||:..||..:|:|...|.|::|.:|:|||.:..|..|.:|.........:
 Frog   182 HGWQFHGEDGKCTRIPYAEKVPDFAKIKTRASCELNGMVFVWYHCDGVEPTWSVPEQEEITKKEW 246

  Fly   226 VYHGHNEFYINCHIQEIPENGADIAHFNAIHKKNFINGSWAQ--KKRLFGLGSHHWKARWSPFTG 288
            ||||..|.|:|.||:|||||.|||||.:.:|....::|...:  |.|::....|.||.:|.|...
 Frog   247 VYHGRTEHYVNAHIEEIPENAADIAHLDFLHTPGILSGVDLRYTKSRIWDFVKHSWKVQWIPEPS 311

  Fly   289 KLKYLAEVNLSHTFKLFGK-FGCFRMEVSGKQIGPSIVCLEVNSYTFGKIKVFQYITPIEPMLQK 352
            ..|:.:::.|:|:..|||| |....:.|..:|:||.||.|.......|:..:...:||:||:|||
 Frog   312 PNKHCSQMLLAHSILLFGKHFPLLDVNVVARQVGPGIVFLHFKHAFLGQGVILHCVTPVEPLLQK 376

  Fly   353 VVHEFYGPRWIAPLM-KIFIYGESLMFERDIKIWNHKVFNRNPILAKEDASIKKFRLWFSQFYSS 416
            |.|..|..|.|..|: |..:..|.:.||||:.|||:|.:...|:|.||||:|:|.|.|||||||.
 Frog   377 VAHSIYYQRNIPSLIPKFILKAECIQFERDVMIWNNKKYISKPMLVKEDAAIQKHRRWFSQFYSD 441

  Fly   417 NSKIYS-EATNIGW 429
            ||...| :...:.|
 Frog   442 NSPQMSFQQEGLDW 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nvdNP_001097670.1 Rieske_RO_Alpha_N 97..210 CDD:239551 51/112 (46%)
XB5992703NP_001135588.1 Rieske_RO_Alpha_N 118..231 CDD:239551 51/112 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 194 1.000 Domainoid score I3119
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H50774
Inparanoid 1 1.050 310 1.000 Inparanoid score I2557
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1199207at2759
OrthoFinder 1 1.000 - - FOG0009655
OrthoInspector 1 1.000 - - oto104924
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5524
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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