DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43795 and gabbr2

DIOPT Version :10

Sequence 1:NP_001097435.2 Gene:CG43795 / 5740629 FlyBaseID:FBgn0264339 Length:1420 Species:Drosophila melanogaster
Sequence 2:NP_001016007.2 Gene:gabbr2 / 548761 XenbaseID:XB-GENE-5815161 Length:962 Species:Xenopus tropicalis


Alignment Length:1124 Identity:205/1124 - (18%)
Similarity:376/1124 - (33%) Gaps:390/1124 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PEAVGAEGAAGPGSPAPRNRIK---AEADALMTGDSFNIRHGRSRSHFLHGSTNSSSSSGIGSGG 93
            |:|.||.||......:|:..|:   .....|:......:..|     |::||..::.... .:|.
 Frog    21 PQAAGAGGAESATGVSPKPAIQMPMLPPQCLLLVLGLGLGPG-----FVYGSRGTTIEQP-ANGT 79

  Fly    94 GTTRLTLIPPTQLPGVG----GTSPAPVTHKIRKLHKKKINESIRKSVD--KSLGLRHTPKNHRS 152
            ..:.:.|:|..:....|    |..||                 ::.::|  :::.|.|.......
 Frog    80 SLSIMGLMPLNETVAKGNIGRGVLPA-----------------VQLAIDQIRNISLLHPYFLDLK 127

  Fly   153 LAE--AEHLQGRPASEDAEDTALSEVMQ-----------LADEIE----LESSFVTAAPTGDPDI 200
            |.:  .::.||..|..||.....:.:|.           :|:.::    ::.||....|      
 Frog   128 LYDTACDNAQGLKAFYDAIKYGPNHLMVFGGVCPSVTSIIAESLKGWNLVQLSFAATTP------ 186

  Fly   201 GVKQARQFVRDEANYQEDDDDTIDDDEELDEEEEEAPMSTTIKPKIASTRLLPVNGTWQRMGTIS 265
                                 .:.|.::........|....:.|.|  .:.|. :..|:|:||::
 Frog   187 ---------------------VLADKKKYPYFFRTVPSDNAVNPAI--VKFLK-HFKWKRVGTLT 227

  Fly   266 RDSPPESDYDSNALDNAQEDEEEEEGQPFGKLLPLNESLATTEWMDDGAQREPEAEARSQAASME 330
            :|           :....|...:..|:                 ::|.|.:..:.|:.|......
 Frog   228 QD-----------IQRFSEVRNDLTGE-----------------LEDSAIQIADTESFSNDPCSS 264

  Fly   331 VKQISFDSDGDSDSEAGLDTSEVTMDDGYPPDAQVDDKTKQLVIGDVEEDSGDNMESNQFTADVI 395
            ||::.           |.|.                    :::||..:|.....:....|..|:.
 Frog   265 VKKLK-----------GNDV--------------------RIIIGQFDEHMAAKVFCCAFDEDMY 298

  Fly   396 NARDSKIDLVSKFLQYIEQQHLMGSNCVAGTSLNLGEGVVDRYAQDRFRVEAEVAVNRANMLTRI 460
            .::...|  :..:.|.:..|....|.|.....|...||.              :.|:...:.|:.
 Frog   299 GSKYQWI--IPGWYQALWWQQANTSTCSTKNLLTAMEGY--------------IGVDFEPLSTKQ 347

  Fly   461 FKT-TGRSVQEDVNLLHASVLSMVEFDDDIFAAGNCFDWNEHPA--QPGLFCPFAYRLPPPNLGA 522
            .|| :||:.|:...                       ::||..|  :|..|..:||.      |.
 Frog   348 IKTISGRTPQQYEK-----------------------EYNEKRAGVEPSKFHGYAYD------GI 383

  Fly   523 -VFAKDL--AMEYHYLGNTSEWFFLARKNAEKVIARNEQYLKSFHLYSNRTEERIEDDTLAVKYE 584
             |.||.|  |:||                                |||::..:||:|    ..|.
 Frog   384 WVIAKTLHRALEY--------------------------------LYSSKQRQRIQD----FNYT 412

  Fly   585 DGRWSKPYYDC-GGGNIWMLTYTVPF-FGYENGTYHF-KGTSGIDIDLRRVDIDQCPQRHTPGTK 646
            |.:..|.:.|. ...|.:.:|..|.| .|...||..| :...|.::.:...:...........|.
 Frog   413 DHKLGKIFLDAMNETNFFGVTGQVVFRNGERMGTIKFTQFQDGKEVKVGEYNAVADSLELINDTI 477

  Fly   647 RPLNIFAGTDKCKQRTTMCEAIMGLGFRRGSYKCLCRKGFYFPDIVSQHKFFNGSLLEEEYEKLM 711
            |    |.|.:..|.:|.:.|.               |:..|.|                      
 Frog   478 R----FQGVEPPKDQTFIREE---------------RRQIYLP---------------------- 501

  Fly   712 LGKNSTYNSNSEYECLPCAEGCDSCEDSSPCIAALNWPMRTSILALACIVIGLLPPAA--WFTFR 774
                 .|                                  |||: ...:||::..:.  :|..:
 Frog   502 -----LY----------------------------------SILS-TLTIIGMIMASTFLFFNIK 526

  Fly   775 YQQVKVVRAASPALLRVIALGAFFIYCTNIVM-----YPNPNLY--TCTARIWLREIGFSLTYGA 832
            .:..|:::.:||.:..:|.||....|.:..:.     :.:.|.:  .||.|.|:..:|::..:||
 Frog   527 NRNQKLIKMSSPYMNNLIILGGMLSYASIFLFGLDGSFVSANTFETLCTVRTWILTVGYTTAFGA 591

  Fly   833 LMLKTWRISVIFRVRSAKAVKITDAALLKRLGIICGA---IGTCLLVRTLVSPPDVVVGRTADD- 893
            :..||||:..||:....|...|.|..||    :|.|.   |..|:|:...:..|   :.||.:: 
 Frog   592 MFAKTWRVHAIFKNVKMKKKIIKDQKLL----VIVGGMLLIDLCILICWQIVDP---LKRTVEEY 649

  Fly   894 ------------LKAFL--CK----TDWWD--YTFTSMEVL---FLAWGVRLCIMVRKAPSEFNE 935
                        ::.||  |:    |.|..  |.:..:.:|   ||||..|     ..:....|:
 Frog   650 NLEPDPAGRDIAIRPFLEHCENTHMTIWLGIVYAYKGLLMLFGCFLAWETR-----NVSIPALND 709

  Fly   936 SRFISMAIYNEFLLTCFLNVSMLFLQSPANPDLLY-----IIFFCHTQLTVTLLLALIFGSKVYI 995
            |::|.|::||..:: |.:..::.|| :...|::.:     :|.||.     |:.|.|:|..|: |
 Frog   710 SKYIGMSVYNVGIM-CIIGAAVSFL-TRDQPNVQFCIVALVIIFCS-----TITLCLVFVPKL-I 766

  Fly   996 VLRSGKSHQENIGMGTKASGAKFNFRPQVRTFANPSSVTTSTVPVAAETKL----SDQEAL---- 1052
            .||:...        ......:|.|....:...:.:|.:.::|..|:.::|    |:...|    
 Frog   767 TLRTNPD--------AATQNRRFQFTHNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKI 823

  Fly  1053 ----EEIRQLSMQLQRIQE 1067
                :::.:::||||...|
 Frog   824 TELDKDLEEVTMQLQDTPE 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43795NP_001097435.2 PDC1_MCP_like 448..629 CDD:350338 41/189 (22%)
7tmC_GPR158-like 749..998 CDD:320420 71/289 (25%)
TM helix 1 749..774 CDD:320420 6/26 (23%)
TM helix 2 786..807 CDD:320420 5/25 (20%)
TM helix 3 816..840 CDD:320420 9/23 (39%)
TM helix 4 859..879 CDD:320420 7/22 (32%)
TM helix 5 901..927 CDD:320420 9/30 (30%)
TM helix 6 935..958 CDD:320420 6/22 (27%)
TM helix 7 967..992 CDD:320420 7/29 (24%)
gabbr2NP_001016007.2 PBP1_GABAb_receptor 83..481 CDD:380589 97/588 (16%)
7tmC_GABA-B-R2 501..770 CDD:320421 74/350 (21%)
TM helix 1 501..526 CDD:320421 8/86 (9%)
TM helix 2 538..559 CDD:320421 5/20 (25%)
TM helix 3 575..599 CDD:320421 9/23 (39%)
TM helix 4 618..638 CDD:320421 7/23 (30%)
TM helix 5 674..700 CDD:320421 8/25 (32%)
TM helix 6 709..732 CDD:320421 6/23 (26%)
TM helix 7 739..764 CDD:320421 7/29 (24%)
GBR2_CC 800..838 CDD:465774 7/37 (19%)

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