DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43795 and smog

DIOPT Version :10

Sequence 1:NP_001097435.2 Gene:CG43795 / 5740629 FlyBaseID:FBgn0264339 Length:1420 Species:Drosophila melanogaster
Sequence 2:NP_001245881.1 Gene:smog / 33690 FlyBaseID:FBgn0051660 Length:951 Species:Drosophila melanogaster


Alignment Length:1136 Identity:231/1136 - (20%)
Similarity:400/1136 - (35%) Gaps:286/1136 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RKLHKKKINESIRKSVDKSLGLRHTPKNHRSLAEAEHLQGRPASEDAEDTA---LSEVMQLADEI 183
            :|.|:.:.|..: :|..:|....|:.::|.:..:.:..| |..|..|...|   |||..:.  .|
  Fly    35 KKCHQNQTNTQV-QSTQRSNCSSHSDRDHLTNQQKQQNQ-RTNSATAASAAAATLSESTRC--NI 95

  Fly   184 ELESSFVTAAPTGDPDIGVKQARQFVRDEANYQEDDDDTIDDDEELDEEEEEAPMSTTIKPKIAS 248
            .:.||..:::.|        ::.:.:|:.::......:|:.....|        :...:....||
  Fly    96 IISSSSSSSSST--------KSSKNIREPSSSSSTQLNTLYSLLVL--------LIVGLATATAS 144

  Fly   249 TRLLPVNGTWQR-------MGTISRDSPPESDYDSNALDNAQEDEEEEEGQPFGKLLPLNESLAT 306
            ....|.:..:.|       :....|...|:|.....:|.:......:..|..|.:|.|...|::.
  Fly   145 PSPSPSHAPFGRESRRDALLAYYKRAHLPQSSSSGISLGHKYHLLHDANGLDFDELTPTASSVSA 209

  Fly   307 TEWMDDGAQREPEAEARSQAASMEVKQISFDSDGDSDSEAGLDTSEVTMDDGYPPDAQVDDKTKQ 371
            ....:....|:..|...:.|.:..|..:    |..:.:.|..|.:......|..|:.:.:.|..:
  Fly   210 LSRAERFRLRKRSATPTTPATAAGVTSL----DVATAAAAATDAAAKDAGSGKKPEEKCEPKVLE 270

  Fly   372 LVIGDVEEDSGDNMESNQFTADVINARDSKIDLVSKFLQYIEQQHLMGSNCVAGTSLNLGEGVVD 436
            .:..:...|..|..|                |...:|:::     |.|....|.|.:.:.|    
  Fly   271 TLPDEPFYDYTDIAE----------------DAARQFIEF-----LSGKFPNANTPIAIDE---- 310

  Fly   437 RYAQDRFRVEAEVAVNRANMLTRIFKTTGRSVQEDVNLLHASVLS------MVEFDDDIFAAGNC 495
                   ...|||: .|||.:      ...::.||.|||..::.:      :|:|.|::      
  Fly   311 -------PTRAEVS-RRANGI------ASYALNEDDNLLAFAIAAPSIHTVVVKFRDNV------ 355

  Fly   496 FDWNEHPAQPGLFCPFAYRLPPPNLGAVFAKDLAMEYHYLGNTSEWFFLARKNAEKVIARNEQYL 560
                              .:||         |......|||:                     |.
  Fly   356 ------------------TIPP---------DQVHNKAYLGS---------------------YW 372

  Fly   561 KSFHLYSNRTEERIEDDTLAVKYEDGRWSKPYYDCGGGNI----WMLTYTVPFFGYENGTYHFKG 621
            :......|.|:...|            |..|:.||   |:    |:..:.:.|     ..:..|.
  Fly   373 RELGAAWNSTDGTQE------------WGAPFRDC---NLLTRRWLWPFRISF-----SEHRIKV 417

  Fly   622 TSGIDIDLRRVDIDQCPQRHTPGTKRPLNIFAGTDKCKQRTTMCEAIMGL-GFRRGSYKCLCRKG 685
            .:...|   ..|.|.|    ..|.:   .:|.....|.:.||.|...... ...|..|.||||:.
  Fly   418 VAAAFI---AADEDVC----NDGLE---EVFGRRHGCDRNTTFCLLTENKPAATRDVYTCLCRES 472

  Fly   686 FYFPDIVSQHKFFNGSLLE--EEYEKLMLGKNSTYNSNSEYECLPCAEGCDSCEDSSPCIA---- 744
            :|.|:...|.  |.|..:|  |.|:              .|.|:||..||.:|:.:..|:.    
  Fly   473 YYLPNSTLQG--FRGDRVELSEGYD--------------NYSCIPCPGGCTNCDSNGVCLTFQEE 521

  Fly   745 -ALNWPMRTSILA--------LACIVIGLLPPAAWFTFRYQQVKVVRAASPALLRVIALGAFFIY 800
             .||......:|.        |.|||:|::      .||.::.|.:.:....:|..|.||...:|
  Fly   522 EVLNVDACLRLLVAIVLGACILCCIVLGVI------VFRQRKCKAIASGMWTVLETILLGIVLLY 580

  Fly   801 CTNIVMYPNPNLYTCTARIWLREIGFSLTYGALMLKTWRISVIFRVRSAKAVKITDAALLKRLGI 865
            .:..|.:...:...|....||||:||...|||::||.:|..|.||.|.|....:.|..|||.||.
  Fly   581 ASVAVHFFPASTERCLLEPWLRELGFITCYGAIILKLYRHLVDFRTRKAHRWVLRDVDLLKYLGT 645

  Fly   866 ICGAIGTCLLVRTLVSPPDVVVGRTADDLK---AFLCKTDWWDYTFTSMEVLFLAWGVRLCIMVR 927
            :..|: .|.:.....|..|::.....:.|:   ...|....|:....:.|:|.|.:|:.|.|..|
  Fly   646 MVFAV-ICYMAAFTASSLDLLESAQLESLREADTNTCHPLKWELVTQTSEMLILCFGLHLSIASR 709

  Fly   928 KAPSEFNESRFISMAIYNEFLLTCFLNVSMLFLQ----SPANPDLLYIIFFCHTQLTVTLLLALI 988
            .|.::|.|.:|:..|:..|||::.    |..||:    ...:|..:.:..|..:|||.:..|.||
  Fly   710 NANTQFRERQFLVTALTLEFLVSS----SFYFLRFVYLPEMSPSAILLALFIRSQLTNSFALGLI 770

  Fly   989 FGSKVY------------IVLR------SGKSHQENIGMGTKASGAKFNFRPQVRTFANPSSVTT 1035
            |..|::            :.:|      .|.||.....:|...:|.         ...:| .:..
  Fly   771 FVPKLWYQHKQVRSLAYDLSIRLPVDAFKGTSHDAGQRLGGGYAGL---------CLGDP-DIGE 825

  Fly  1036 STVPVAAETKLSDQEALEEIRQLSMQLQRIQEMAPPKGVAVMTISSLLDGLKTPGGLMVVAAAAG 1100
            .|:     :::|.::...|:::|..||:            :|...:|..  ..|.    ::...|
  Fly   826 LTI-----SEMSPEDIRAELKRLYTQLE------------IMKNKTLRQ--DNPH----ISKRRG 867

  Fly  1101 ATAQGHSAANRQSALPLLALNVEMQKYSQQNNNSNGGRGSGRTSIPTMVLETPPSSTP-PSAAYE 1164
            ....||.             ...:||...::...:....|.:......:.|..||.|| .|....
  Fly   868 GRKAGHR-------------RFSLQKKGSKDKALSAKHRSNKHHQDIEITEAEPSRTPEDSVCSA 919

  Fly  1165 ERAVNT--ELSGDDFREQLLRRTADGHIICS 1193
            |...:|  |:||  ....:|..:...|.:.|
  Fly   920 EGPTDTYAEISG--VSHSMLSHSMVSHSVVS 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43795NP_001097435.2 PDC1_MCP_like 448..629 CDD:350338 32/190 (17%)
7tmC_GPR158-like 749..998 CDD:320420 74/275 (27%)
TM helix 1 749..774 CDD:320420 6/32 (19%)
TM helix 2 786..807 CDD:320420 6/20 (30%)
TM helix 3 816..840 CDD:320420 11/23 (48%)
TM helix 4 859..879 CDD:320420 7/19 (37%)
TM helix 5 901..927 CDD:320420 7/25 (28%)
TM helix 6 935..958 CDD:320420 7/22 (32%)
TM helix 7 967..992 CDD:320420 8/24 (33%)
smogNP_001245881.1 7tmC_GPR158-like 529..780 CDD:320420 74/261 (28%)
TM helix 1 529..554 CDD:320420 6/30 (20%)
TM helix 2 566..587 CDD:320420 6/20 (30%)
TM helix 3 596..620 CDD:320420 11/23 (48%)
TM helix 4 639..659 CDD:320420 7/20 (35%)
TM helix 5 683..709 CDD:320420 7/25 (28%)
TM helix 6 717..740 CDD:320420 9/26 (35%)
TM helix 7 749..774 CDD:320420 8/24 (33%)

Return to query results.
Submit another query.