DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc20 and Dnaja3

DIOPT Version :10

Sequence 1:NP_001097616.1 Gene:Hsc20 / 5740624 FlyBaseID:FBgn0263606 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_076135.3 Gene:Dnaja3 / 83945 MGIID:1933786 Length:480 Species:Mus musculus


Alignment Length:112 Identity:26/112 - (23%)
Similarity:48/112 - (42%) Gaps:23/112 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PEIRKFSVESSPACWNCQKKSELKQNMICSDCGHLQDVNSGINYFKLLSFPIQFSLESQK-LTRS 96
            |.:|....:|.|              .:|:...|.....:..:|:::|..|..   .||| :.::
Mouse    65 PGVRLTGTKSFP--------------FVCTTSFHTSASLAKDDYYQILGVPRN---ASQKDIKKA 112

  Fly    97 FRQLQTIVHPDKYSNKTSREQTNSSDWSSLINKAYKTLSTPIDRGQY 143
            :.||....|||     |:::...:.:..|.:.:||:.||..:.|.||
Mouse   113 YYQLAKKYHPD-----TNKDDPKAKEKFSQLAEAYEVLSDEVKRKQY 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc20NP_001097616.1 hscB 75..239 CDD:235133 20/70 (29%)
Dnaja3NP_076135.3 DnaJ_bact 93..429 CDD:274090 20/70 (29%)
CXXCXGXG motif 236..243
CXXCXGXG motif 253..260
CXXCXGXG motif 275..282
CXXCXGXG motif 289..296
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..468
Blue background indicates that the domain is not in the aligned region.

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