DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc20 and hscb

DIOPT Version :9

Sequence 1:NP_001097616.1 Gene:Hsc20 / 5740624 FlyBaseID:FBgn0263606 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001072422.2 Gene:hscb / 779876 XenbaseID:XB-GENE-5793329 Length:268 Species:Xenopus tropicalis


Alignment Length:227 Identity:74/227 - (32%)
Similarity:127/227 - (55%) Gaps:10/227 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KSAVKATNYTPLVRNAAQFNQFQLPEIRKFSVES-SPACWNCQKKSELKQNMICSDCGHLQDVNS 72
            |||..|.:.:.| |::..::      :|.|.|.| |..||.||.:.. :..:.|..|..||..:.
 Frog    47 KSATSAMSRSTL-RSSCTYS------LRSFCVTSQSRLCWRCQAEMS-RAELFCPTCTSLQPPDE 103

  Fly    73 GINYFKLLSFPIQFSLESQKLTRSFRQLQTIVHPDKYSNKTSREQTNSSDWSSLINKAYKTLSTP 137
            ..::|::|.....|::::|:|.|.:|.||.::|||.:|.|:..|:..|...|:::|||||||.:|
 Frog   104 SKDFFQVLDCEKSFNVDTQELQRKYRNLQRLLHPDFFSQKSESERNISEKQSTVVNKAYKTLLSP 168

  Fly   138 IDRGQYLLQLEGEQMPQD-NSALNKEFLMAMMERNEEVEDAEDTQTLENLNIQLIKELEEMARKL 201
            :.||.|||.|.|..:.:. :..::.:||..::|.||::.|||....:|.:...:.::|..:.:.|
 Frog   169 LKRGVYLLSLNGITLKEGADDEVDTQFLFDILELNEQLNDAETKDDIEEVGHFVQEQLVSLTKDL 233

  Fly   202 NALFDSKDLSGVKETLVEMKYLLSIQNSIKQK 233
            ...|...||...|..|.:|||..:||:.:|:|
 Frog   234 RKAFQQGDLQEAKILLAKMKYFSNIQDQVKKK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc20NP_001097616.1 hscB 75..239 CDD:235133 55/160 (34%)
DnaJ 75..135 CDD:99751 23/59 (39%)
HSCB_C 159..231 CDD:285042 21/71 (30%)
hscbNP_001072422.2 hscB 106..262 CDD:179914 53/155 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I9915
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13945
Inparanoid 1 1.050 114 1.000 Inparanoid score I4697
OMA 1 1.010 - - QHG54294
OrthoDB 1 1.010 - - D1129824at2759
OrthoFinder 1 1.000 - - FOG0004407
OrthoInspector 1 1.000 - - oto102545
Panther 1 1.100 - - LDO PTHR14021
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3856
SonicParanoid 1 1.000 - - X4795
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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