DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc20 and dnaja3a

DIOPT Version :10

Sequence 1:NP_001097616.1 Gene:Hsc20 / 5740624 FlyBaseID:FBgn0263606 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_958470.2 Gene:dnaja3a / 335894 ZFINID:ZDB-GENE-030131-7837 Length:453 Species:Danio rerio


Alignment Length:86 Identity:18/86 - (20%)
Similarity:43/86 - (50%) Gaps:7/86 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NMICSDCGHLQDVNSGINYFKLLSFPIQFSLESQKLTRSFRQLQTIVHPDKYSNKTSREQTNSSD 122
            :::|....|....:...:::::|..|  .|...:::.:::.|:....|||     |::|...:.:
Zfish    74 HVVCKMSFHTSAPSRKQDFYQILGVP--RSATQKEIKKAYYQMAKKYHPD-----TNKEDPQAKE 131

  Fly   123 WSSLINKAYKTLSTPIDRGQY 143
            ..:.:.:||:.||..:.|.||
Zfish   132 KFAQLAEAYEVLSDEVKRKQY 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc20NP_001097616.1 hscB 75..239 CDD:235133 16/69 (23%)
dnaja3aNP_958470.2 None

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