DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34451 and c1galt1a

DIOPT Version :9

Sequence 1:	NP_001369052.1	Gene:	CG34451 / 5740612	FlyBaseID:	FBgn0085480	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_001070842.1	Gene:	c1galt1a / 557675	ZFINID:	ZDB-GENE-061013-303	Length:	408	Species:	Danio rerio

Alignment Length:	281	Identity:	89/281 - (31%)
Similarity:	132/281 - (46%)	Gaps:	39/281 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 KRSNQ-----HTLDPLYEEIRILCMI---PYNYNSPDTAKYVKRTWGKHCNVLLFVSGDID---- 88
            |..||     |..|.|::::||||.:   |.|..|  .|::||.||.:||||:||:|.:.|
Zfish    73 KHPNQPGEDGHIADELFKKVRILCWVMTGPSNLQS--KAQHVKNTWSRHCNVVLFMSSEEDRSFP 135

  Fly    89 --------GELEPYVPVINSTDTWTLVQQGLMQAYLFYADQIDWFLRVEPSSFVVLENLRYMIHK 145
                    |..:.|         |..: :....|...:..:.||||:.:..:|||::|||:::
Zfish   136 TVGLGTGEGRDQLY---------WKTI-RAFHYALKNHGHEADWFLKADDDTFVVVDNLRWIL-- 188

  Fly   146 RKYQPSQPIYFGYELENIVTHESFVHHHSGYVISREALRRYTMASKDPENKECTHWEGYVEGLDI 210
            ..|.|.||||||...:. .|.:.::...:|||:|:|||||:.   :....|.|||... ||.|.:
Zfish   189 SNYTPEQPIYFGKRFKP-YTKQGYMSGGAGYVLSKEALRRFV---EGFSTKVCTHTTP-VEDLAM 248

  Fly   211 HRCLRFANVTVAESRDEFEHETFLPVTMDYQFLNGYDTIPWLRKLSYHKRTEKTVPISSRAICFL 275
            .:||....|...:|||....|||.|...::.....:....|.....|:...|.....|..|:.|.
Zfish   249 GQCLEKMGVLAGDSRDSLHRETFHPFIPEHHLTGKFSKTFWYWNYCYYPIVEGPQCCSDLAVSFH 313

  Fly   276 VEYPPEMYDYYYFVYRLKIFG 296
            ...|..||...|:.|.|:.||
Zfish   314 YVDPVLMYTLEYYTYHLRPFG 334

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34451	NP_001369052.1	None
c1galt1a	NP_001070842.1	Galactosyl_T	<169..292	CDD:304462	45/129 (35%)
c1galt1a	NP_001070842.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	356..408
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2246
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000473
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23033
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	5	4.870