DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34290 and Tpsab1

DIOPT Version :10

Sequence 1:NP_001097899.2 Gene:CG34290 / 5740609 FlyBaseID:FBgn0085319 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:295 Identity:88/295 - (29%)
Similarity:129/295 - (43%) Gaps:68/295 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLHSLFIISVLESCHAVP--------IVGGRIVSTVGSSTSKYPFMVSLQDVITRNTTNGVSYQH 72
            ||.:|.::|.|  .||.|        ||||:     .:|.:|:|:.|||:       .|...:.|
  Rat    42 LLLTLPLLSSL--VHAAPSLAMPREGIVGGQ-----EASGNKWPWQVSLR-------VNDTYWMH 92

  Fly    73 FCGGSLISDRWILSAAHCV-------------WRKNIHYIAAFIGYENIENIGQLQPYGLESVEY 124
            |||||||..:|:|:|||||             .||...|.     ::::..:.|:       :.:
  Rat    93 FCGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYY-----HDHLLTVSQI-------ISH 145

  Fly   125 IYFQPSNFRNDIALLYMKRRYWSDFGNGLQYAQLPPHGMKPDQNESCRIIGYGATHH--AGPCQK 187
            ..|..:....|||||.:....  :..:.:....|||..........|.:.|:|..::  :.|...
  Rat   146 PDFYIAQDGADIALLKLTNPV--NITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPF 208

  Fly   188 RLFEAEVRVIDNQKCRDIIGHIWAPQNGANT-----------VCALGNNQDSCQGDSGGPLICTY 241
            .|.|.:|.:::|:.| |:..|     .|.||           :||.....|||||||||||:|..
  Rat   209 PLEEVQVPIVENRLC-DLKYH-----KGLNTGDNVHIVRDDMLCAGNEGHDSCQGDSGGPLVCKV 267

  Fly   242 GGKDYIYGLVSHGLTCGIPGMPSIYTVTRPYYDWV 276
            .......|:||.|..|..|..|.|||....|.||:
  Rat   268 EDTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34290NP_001097899.2 Tryp_SPc 34..277 CDD:238113 80/269 (30%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:238113 79/267 (30%)

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