DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and DIP-epsilon

DIOPT Version :10

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster


Alignment Length:431 Identity:111/431 - (25%)
Similarity:179/431 - (41%) Gaps:68/431 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SAQSMMTKNEPMFISRSETFKFITGETIVLPCEVANTDTYVVAWK--RGIAILTAGSVKVTPDPR 138
            |..:.:...:|.|....|......|..:.|.|.|.|..:|.|||.  ...||||..:..:|.:||
  Fly    42 STLNNVISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPR 106

  Fly   139 VRLVNG-------FNLQIRDALPTDAGDYICQIATMDPREITHTVEILVPPRIHHISTGGHLQVK 196
            :.:.:.       :.|.|.:....|.|.|:|||.|:..:.....|:::|||.|....|...:.|:
  Fly   107 ISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSSDIIVR 171

  Fly   197 KGSSVRIECSATGNPMPNVTWSRK--NNILPNGEEKLH---SHVLSIENVDRHKGGVYICTANNR 256
            :|.:|.:.|.|.|:|.|.:.|.|.  |.|:.|...::|   :..|.:|.:.|...|.|:|.|:|.
  Fly   172 EGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNG 236

  Fly   257 VGQPASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHGETQPEVIWFKDTMQLDT-TERHI 320
            |....|.::.:.|.|||.:.:...:|....|...||.|.:.........|.::..|:.| :.::.
  Fly   237 VPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYK 301

  Fly   321 METRGSRHT------LIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSPPISQYKD 379
            .||.....:      |.|..|...|:|||.|||:|..|.....::|       ..:|||.:|...
  Fly   302 TETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKL-------YMSSPPTTQPPP 359

  Fly   380 -----RYNISWAVD------SHSPIEEYKLSFRKLPQGHEVVGNAI----DSSSSSSSMSSSSSQ 429
                 |...:.|.:      .::|:.                ||.|    :..::|...|..||.
  Fly   360 TTTTLRRTTTTAAEIALDGYINTPLN----------------GNGIGIVGEGPTNSVIASGKSSI 408

  Fly   430 MYGSGLHAHRIGSNMGGLSGLSGSG-------SYSGYGNVI 463
            .|.|.|  :.|..:...|:|.|..|       |...:||::
  Fly   409 KYLSNL--NEIDKSKQKLTGSSPKGFDWSKGKSSGSHGNLM 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 26/88 (30%)
Ig strand B 103..107 CDD:409353 1/3 (33%)
Ig strand C 116..120 CDD:409353 2/3 (67%)
Ig strand E 145..149 CDD:409353 1/3 (33%)
Ig strand F 159..164 CDD:409353 2/4 (50%)
Ig strand G 173..176 CDD:409353 0/2 (0%)
Ig 182..269 CDD:472250 27/91 (30%)
Ig strand B 201..205 CDD:409353 1/3 (33%)
Ig strand C 214..218 CDD:409353 0/3 (0%)
Ig strand F 248..253 CDD:409353 2/4 (50%)
Ig strand G 262..265 CDD:409353 1/2 (50%)
Ig_3 273..349 CDD:464046 21/82 (26%)
FN3 <466..524 CDD:238020
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 27/95 (28%)
Ig strand B 69..73 CDD:409353 1/3 (33%)
Ig strand C 82..86 CDD:409353 2/3 (67%)
Ig strand E 117..124 CDD:409353 1/6 (17%)
Ig 157..249 CDD:472250 27/91 (30%)
Ig strand B 176..180 CDD:409289 1/3 (33%)
Ig strand C 189..193 CDD:409289 0/3 (0%)
Ig strand E 213..218 CDD:409289 1/4 (25%)
Ig strand F 228..233 CDD:409289 2/4 (50%)
Ig strand G 242..245 CDD:409289 1/2 (50%)
IG_like 267..348 CDD:214653 22/87 (25%)
Ig strand C 283..287 CDD:409394 0/3 (0%)
Ig strand E 313..319 CDD:409394 1/5 (20%)
Ig strand F 329..334 CDD:409394 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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