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Protein Alignment CG34353 and dscama

DIOPT Version :9

Sequence 1:	NP_001287571.1	Gene:	CG34353 / 5740590	FlyBaseID:	FBgn0085382	Length:	581	Species:	Drosophila melanogaster
Sequence 2:	XP_021334866.1	Gene:	dscama / 568643	ZFINID:	ZDB-GENE-050310-7	Length:	2025	Species:	Danio rerio

Alignment Length:	553	Identity:	123/553 - (22%)
Similarity:	204/553 - (36%)	Gaps:	130/553 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    75 VSAQSMMTKNE--------PMFISRSETFKFITGETIVLPCEVANTDTYV-VAWKRGIAILTAGS 130
            |..|..:.||:        |.||...|..::..|..:.:||.|.:.|..: :.|::....:.| |
Zfish   578 VQVQPQLFKNQSVHVTVKVPPFIQPFEFPRYSIGHRVFVPCVVRSGDLPISITWEKDGKSINA-S 641

  Fly   131 VKVTPDPRVRLVNGFNLQIRDALPTDAGDYICQIATMDPREITHTVEIL--VPPRIHHISTGGHL 193
            :.||.| .:...:  :|:|.:......|.|.| ||..|...:.:..:::  ||||.       .:
Zfish   642 LGVTID-NIDFTS--SLRISNLQRVHNGTYTC-IAQNDAAVVKYQSQLIVRVPPRF-------KV 695

  Fly   194 QVKK-----GSSVRIECSATGNPMPNVTWSRKN------------------NILPNGEEKLHSHV 235
            |.:.     |.||.:.|||.|.|.|.:.|....                  .:|.||.
Zfish   696 QPQDQDGIYGKSVILNCSADGEPRPTIEWKYSKGAGVPQFQPIALNSGFRVQLLGNGS------- 753

  Fly   236 LSIENVDRHKGGVYICTANNRVGQPASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHGET 300
            |.|::|.....|.|:|..:|.||...|..:.|:|.....|:.......:.:|.:..:.|..|||.
Zfish   754 LLIKHVLEEDAGYYLCKVSNDVGADVSKSMYLNVKIPAMITSYPNNSLATKGEKIEMSCKAHGEK 818

  Fly   301 QPEVIWFKDTMQLDTTERHIMETRGSRHTLIIR----------KVHP---QDFGNYSCVAENQLG 352
            ...|.|.|:..:  ..:.|::.....|||:.::          :::|   :|.|.:||.|.|..|
Zfish   819 PIMVRWEKEVEK--EKQSHMINPDMWRHTVTVKNVGDEVVSTLQIYPTMREDSGFFSCHAINSYG 881

  Fly   353 KARKTLQLSGKPNVAVFNSPP------ISQYKDR-YNISWAV--DSHSPIEEYKLSFRKLPQGHE 408
            :.|..|||:       ...||      |.:.|:| ..:.|.:  |.:|.|..|.:..:...:..|
Zfish   882 EDRGILQLT-------VQEPPEPPKVEIREVKERTIALRWTMGFDGNSLITGYDIECKNKTETWE 939

  Fly   409 VVGNAIDSS---SSSSSMSSSSSQMYGSGLHA-HRIGSN-----------------------MGG 446
            ......|.|   :.::.:....|..|...:.| :.||.:                       :..
Zfish   940 RARRTRDVSPTLNQATIIELHPSSTYNIRMFAKNHIGDSEPSNELTVTTDEADPEGPPQDVTLEA 1004

  Fly   447 LSGLS------------GSGSYSGYGNVIHWGH--NDWRNVVLPAVPVSHHYAQGMSYMVRGLDP 497
            ::..|            .:|...|| .|.|..|  |.....|..:|..:   .:..|..:..|..
Zfish  1005 ITSQSIKVTWKAPLKHLQNGVIRGY-QVCHREHSTNGSHQFVCISVEAT---GETESLSLNNLKK 1065

  Fly   498 DQHYEATVQSRNRYGWSDLTNSFVFSTSSNDGP 530
            ...||..||:.|..| ....:|.|.:|:..|.|
Zfish  1066 FAEYEVVVQASNSAG-PGPASSEVRATTMEDVP 1097

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.