DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34353 and igsf9ba

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_009289969.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:628 Identity:128/628 - (20%)
Similarity:222/628 - (35%) Gaps:216/628 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KNEPMFISRSETFKFITGETIVLPCEVAN-----TDTYVVAW-KRGIAILTAGSVKVTP---DP- 137
            :.||.|::..      .||::||.|:|::     ...|||.| |.|:.|....:.:..|   || 
Zfish    27 REEPQFVTAR------AGESVVLGCDVSHPLNGQQTPYVVEWFKFGVPIPFFINFRFYPPHVDPE 85

  Fly   138 ---RVRLVNGFNLQIRDALPTDAGDYICQIATMDPREIT-HT---VEILV---------PPRIHH 186
               |..|....:|||......|.|.|.|::..::.:..| |.   |.:.|         ||:   
Zfish    86 YAGRASLHGKASLQIEQVRSEDQGWYECRVLMLEQQYDTFHNGSWVHLTVNAPPTFSDTPPQ--- 147

  Fly   187 ISTGGHLQVKKGSSVRIECSATGNPMPNVTWSRKNNILPNGEE-KLHSHVLSIENVDRHKGGVYI 250
                 :::.::|.|:.:.|:|.|||.|.|||.|:.:.|.:..: .:....|:::.:.|...|.|.
Zfish   148 -----YVEAREGGSITLTCTAFGNPKPVVTWLREGDQLTSTRKYTVSDGSLTVQAITREDRGAYS 207

  Fly   251 CTANNRVGQPASSQVVL-----HVLFSPE---ISVERPVVFS--GEGHEATLVCIVHGETQPEVI 305
            |.|::..|:...:..:|     :::..||   :::.:...|:  .|.:...|....:.|  .:.:
Zfish   208 CRAHSDQGEALHTTRLLVQGPPYIVTPPENITVNISQNAQFTCQAEAYPGNLTYTWYWE--EDNV 270

  Fly   306 WFKDTMQLDTTERHIMETRGSRHTLIIRKVHPQDFGNYSCVAENQLG-----KARKTLQLSGKPN 365
            :||:.::|..  |..::     .||||.:|.|:|.|.|:|...|.||     .|..|:|...:  
Zfish   271 YFKNDLKLRV--RIFID-----GTLIIYRVKPEDAGKYTCSPSNSLGISPSASAYLTVQYPAR-- 326

  Fly   366 VAVFNSPPISQYKDRYN--ISWAVDSHSPI-------EEYKLSFRKLPQGHEVVGNAI------- 414
              |.|.||:.....:.:  |...||::.|:       :.|.|...|.|...::...:|       
Zfish   327 --VVNMPPVIYVPRKLSGIIRCPVDANPPVTSVRWEKDGYPLRIEKYPGWSQMTDGSIRVAEVTE 389

  Fly   415 ----------------------------------------------------------------- 414
                                                                             
Zfish   390 DSLGTYTCVPYNVLGTMGQSPPATLVLKDPPYFNVRPGGEYRQEAGRELVIPCAASGDPEIPTIQ 454

  Fly   415 ------DSSSSSSSMSSSSSQ------------------------------MYGSGLHA----HR 439
                  .|.|..:.:.|.|.|                              :.|:..||    |.
Zfish   455 WRKVGKPSRSKHNLLPSGSLQFVSLSKEDHGEWECVATNVVTSITASTRLFVIGTSPHAPTNVHV 519

  Fly   440 IGSNMGGLSGLSGSGSYSG---------YGNV---IHWGHNDWRNVVLPAVPVSHHYAQGMSYMV 492
            ..|...  :.:|....|.|         ||.|   ...|.:||.::.:|        ...|..:|
Zfish   520 SASTSS--ANVSWEPGYDGGFEQTFSVWYGPVKVKNDVGTHDWLSIPVP--------GSQMWLVV 574

  Fly   493 RGLDPDQHYEATVQSRNRYGWSDLTNSFVFSTSSNDGPVDLST 535
            :||:|...|:.:|.::|:.|    |..|....:...|...:||
Zfish   575 QGLEPKTAYQFSVLAQNKLG----TGPFSEVVTVTTGGYPIST 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 28/96 (29%)
Ig 103..177 CDD:143165 25/90 (28%)
IG_like 191..269 CDD:214653 21/83 (25%)
IGc2 198..258 CDD:197706 19/60 (32%)
I-set 273..360 CDD:254352 25/96 (26%)
Ig 290..359 CDD:143165 21/73 (29%)
FN3 <466..524 CDD:238020 15/57 (26%)
igsf9baXP_009289969.2 IG 30..115 CDD:214652 27/90 (30%)
I-set 139..225 CDD:254352 22/93 (24%)
I-set 229..321 CDD:333254 24/100 (24%)
Ig 345..415 CDD:325142 8/69 (12%)
Ig 438..503 CDD:319273 5/64 (8%)
FN3 511..606 CDD:238020 25/108 (23%)
FN3 622..706 CDD:238020
Atrophin-1 <924..1361 CDD:331285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.