DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and lrit3a

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:430 Identity:73/430 - (16%)
Similarity:121/430 - (28%) Gaps:180/430 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 PTDAGDYICQIATMD----PREITHTVEILVPPRIHHISTGGHLQVKKGSSVRIECSATGNPMPN 214
            |......:.|.|.:|    |..:|...:|..|               .||:|.:.|.|.|.|.|.
Zfish   233 PEHLSGVLFQRAELDQC
VKPTVMTSATKITSP---------------LGSNVLLRCDANGFPTPT 282

  Fly   215 VTWSRKNNILPNGE-------EKLHSHVLSIENVDRHKGGVYICTANNRVG-------------- 258
            :.|:..:..:.|..       |.:...:||:.::.....|.|.|.|.|..|              
Zfish   283 LLWTTADGSVVNNTVVQESPGEGVRWSILSLHSIVFKDAGDYRCKAKNVAGNAEAYITLSVDGVQ 347

  Fly   259 ----------------QPAS----SQVVLHVLFSPEISVERPVVF-------------------- 283
                            ||.:    :::.|....||.....|||:.                    
Zfish   348 PTTPFPPINITKQPEDQPTTTFTPTKMPLFTSLSPITITTRPVMTTMPPLTTRKSPIPGGGVQRS 412

  Fly   284 --------------SGEG----HEATLVCIVHGETQPEV-IWFKDTMQLDT------------TE 317
                          :|:|    .:...:.:|...|:..| :|..:.:..||            .:
Zfish   413 PPAGDKPAKVQQSKNGKGSIKKSDIRDIEVVEETTETAVLLWSAEGLPSDTPLTVVYFPYDAKDD 477

  Fly   318 RHIMETRGSRHTLIIRKVHPQDFGNYS-CVAENQLGKAR----KTLQLSGK-------------- 363
            :..::|...:..|::..:.|...  |: |:.....||.:    .||::.|:              
Zfish   478 KETVDTEVGQGKLLLEYLMPNQV--YTVCLVTKSSGKEQCVDFSTLEIGGEEGQNKVLMIASAIA 540

  Fly   364 -----PNVAVF----------------NSPPISQYKDRY-----------------NISWAVDSH 390
                 |.:.|.                |.|.....||.|                 |..||....
Zfish   541 CAIAVPLIVVLLYKILCLYCKGNSSRNNGPDEDLSKDTYVKFETLTMKQRTLNGQANDLWARRQT 605

  Fly   391 SPIEEYKLSFRKLPQGHEVVGNAIDSSSSSSSMSSSSSQM 430
            ...|...|..|          ::|||..:..|.||.|..:
Zfish   606 QESERMLLCSR----------SSIDSQMTYKSDSSRSEYL 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 7/29 (24%)
Ig 103..177 CDD:143165 6/26 (23%)
IG_like 191..269 CDD:214653 22/118 (19%)
IGc2 198..258 CDD:197706 18/66 (27%)
I-set 273..360 CDD:254352 21/142 (15%)
Ig 290..359 CDD:143165 14/86 (16%)
FN3 <466..524 CDD:238020
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566
leucine-rich repeat 83..106 CDD:275378
LRR_4 107..145 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_8 129..>171 CDD:290566
LRR_4 129..170 CDD:289563
leucine-rich repeat 131..154 CDD:275378
leucine-rich repeat 155..168 CDD:275378
TPKR_C2 199..249 CDD:301599 4/15 (27%)
Ig 252..343 CDD:299845 23/105 (22%)
IG_like 261..343 CDD:214653 21/96 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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