DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34353 and sdk1b

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_017211454.1 Gene:sdk1b / 555553 ZFINID:ZDB-GENE-090311-17 Length:2292 Species:Danio rerio


Alignment Length:544 Identity:123/544 - (22%)
Similarity:198/544 - (36%) Gaps:107/544 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IRDRRVGSLPHILFLAIAVVSLHFESVSAQSMMTKNEPMFISRSETFKFITGET-IVLPCEVANT 112
            |..|..|||..::..|..|.                 |:.:...:....:.|.: ..|.| |||.
Zfish   348 INKRNRGSLADVIAPAELVA-----------------PVIVIAPKNTSVVAGASEATLEC-VANA 394

  Fly   113 ---DTYVVAWKRGIAILTAGSVKVTPDPRVRLVNGFNLQIRDALPT--DAGDYICQI----ATMD 168
               |...|.|||....||||            |:.|..::..:.||  |.|.|:|:.    ::..
Zfish   395 RSLDRLQVFWKRNGVRLTAG------------VDSFGRRLVISNPTSADGGLYVCEATLRNSSQK 447

  Fly   169 PREITHTVEILVPPRIHHISTGGHLQVKK-GSSVRIECSATGNPMPNVTWSRKN---NILPNGEE 229
            ..|....:.:|..|  |..|......:.: ..:|.::|.|.|.|.|.:.|.:..   :.|.|...
Zfish   448 STEAKAYLSVLESP--HFTSKPKRYMIAEVEKNVELQCHAKGVPTPKLEWFKDAIPLSTLNNSRY 510

  Fly   230 KL--HSHVLSIENVDRHKGGVYICTANNRVGQPASSQVVLHVLFSPEISVERPVVFSGEGHEATL 292
            ||  .|.||.:..:.....|::.|.|.|..|:..:...::....||..:.....:...:|..|..
Zfish   511 KLTTSSMVLQVRRIQPDDAGIFQCFAENTAGEIQAHTNLVITSMSPLFTTPPSDITVTDGTSAVF 575

  Fly   293 VCIVHGETQPEVIWFKDTMQL-----DTTERHIMETRGSRHTLIIRKVHPQDFGNYSCVAENQLG 352
            .|...|..:|.::|.|.:..|     .|....::|:.|    |.|..:.|.|.|||:|:|.|..|
Zfish   576 TCDTSGAPKPAIVWRKGSQVLASGSVQTPRFTLLESGG----LQILPIMPSDAGNYTCLASNTEG 636

  Fly   353 KARKTLQLSGKPNVAVFNSPPISQ--YKDRYNISWAVDSHSPIEEYKLSFRKLPQGHEVVGNAID 415
            ....|:.|:......: ::||..|  .|....:.....:|.|....:.|::|        |....
Zfish   637 LVNATVALTVLSRTFI-STPPEDQRVIKGTTAVLHCAATHDPRVTVRYSWKK--------GTKPL 692

  Fly   416 SSSSSSSMSSSSSQMYGSGLHAHRIGSNMGGLSGLSGSGSYSGYGNVIHWGHN-----------D 469
            |.|:...:|.....:..|...:..||.....:...:|:.|.|....||...|:           |
Zfish   693 SVSTGGRVSMKEGSLQISQTWSGDIGDYTCRVISPAGNDSKSARLEVIELPHSPRNLQVALNETD 757

  Fly   470 WRNVVLPAV-------PVSHH-------------YAQGM-----SYMVRGLDPDQHYEATVQSRN 509
            .|.|:|..|       |:.|:             |...:     |.:|.||.|.:.|:..|.:.|
Zfish   758 SRTVLLSWVRPFDGNSPLLHYIIEFSENNSPWKVYMDDVSPTLASLLVIGLTPARTYQFRVCAVN 822

  Fly   510 RYG---WSDLTNSFVFSTSSNDGP 530
            :.|   :|..||..:........|
Zfish   823 QVGRGQYSAETNRLMLREEPPSAP 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 24/89 (27%)
Ig 103..177 CDD:143165 23/82 (28%)
IG_like 191..269 CDD:214653 19/83 (23%)
IGc2 198..258 CDD:197706 18/64 (28%)
I-set 273..360 CDD:254352 24/91 (26%)
Ig 290..359 CDD:143165 22/73 (30%)
FN3 <466..524 CDD:238020 21/96 (22%)
sdk1bXP_017211454.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.