DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and DIP-kappa

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster


Alignment Length:380 Identity:106/380 - (27%)
Similarity:162/380 - (42%) Gaps:68/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PMFISRSETFKFITGETIVLPCEVANTDTYVVAWKR--GIAILTAGSVKVTPDPRVRLV----NG 144
            |.|...........|...::.|.|.|...|.|||.|  ...||:.....::.:.|:.|.    ..
  Fly    74 PRFAEPIANVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRS 138

  Fly   145 FNLQIRDALPTDAGDYICQIATMDPREITHTVEILVPPRIHHISTGGHLQVKKGSSVRIECSATG 209
            :.|.|::...||.|.|:||:.|...|.....::::|||.|....|...:.|::|.::.:.|.|.|
  Fly   139 WYLHIKEVEETDRGWYMCQVNTDPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCKARG 203

  Fly   210 NPMPNVTWSRKNNILPNGEEKL----HSHV-----LSIENVDRHKGGVYICTANNRVGQPASSQV 265
            .|.|.|.|.|:     :|||.|    |.:|     |.|..|.|.....|:|.|:|.|....|.:|
  Fly   204 YPEPYVMWRRE-----DGEEMLIGGEHVNVVDGELLHITKVSRLHMAAYLCVASNGVPPSISKRV 263

  Fly   266 VLHVLFSPEISVERPVVFSGEGHEATLVCIVHGETQPEVI--WFKDTMQLDTTERHIM------- 321
            .|.|.|.|.:|:...:..:..|.:..|.|  |.|..|..|  |        ||||..|       
  Fly   264 HLRVQFPPMLSIPNQLEGAYLGQDVILEC--HTEAYPASINYW--------TTERGDMIISDTSR 318

  Fly   322 -----ETRG--SRHT----LIIRKVHPQDFGNYSCVAENQLGKARKTLQLS--GKPNVAVFNSPP 373
                 ||..  |.:|    |.||.|.|.|||.|.|||:|.||:....::|.  ..|..|:.:...
  Fly   319 AGDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETDGNIKLDEMPTPTTAIISEMS 383

  Fly   374 I--------SQYKDRYNISWAVDSHSPIEEYKL-SFRKLPQGHEVVGNAIDSSSS 419
            :        .::::::      ||.:.:.:|.: .:|...||:. .||..|::.:
  Fly   384 LLNRSYDGKRRHRNKF------DSANALPDYGVEEWRDGAQGNN-AGNNGDNNQT 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 23/85 (27%)
Ig 103..177 CDD:143165 22/79 (28%)
IG_like 191..269 CDD:214653 28/86 (33%)
IGc2 198..258 CDD:197706 23/68 (34%)
I-set 273..360 CDD:254352 34/106 (32%)
Ig 290..359 CDD:143165 31/88 (35%)
FN3 <466..524 CDD:238020
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 23/91 (25%)
IG_like 82..174 CDD:214653 23/91 (25%)
IG_like 184..267 CDD:214653 28/87 (32%)
IGc2 191..255 CDD:197706 23/68 (34%)
IG_like 282..368 CDD:214653 32/95 (34%)
Ig 288..367 CDD:143165 31/88 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
32.810

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