back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34353 and Lrit1

DIOPT Version :9

Sequence 1:	NP_001287571.1	Gene:	CG34353 / 5740590	FlyBaseID:	FBgn0085382	Length:	581	Species:	Drosophila melanogaster
Sequence 2:	NP_666357.2	Gene:	Lrit1 / 239037	MGIID:	2385320	Length:	624	Species:	Mus musculus

Alignment Length:	437	Identity:	91/437 - (20%)
Similarity:	164/437 - (37%)	Gaps:	87/437 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   137 PRVRLVNGFNLQIR--DALPTDAGDYICQIATMDPREITHTVEILVPPRI----HHISTGGHLQV 195
            |:::|:   :||..  ..||.:|..::..:..:|   :::...:.:|..:    .|:.||..|
Mouse   131 PQLQLL---DLQANRLSTLPPEAAHFLENLTFLD---LSNNQLMRLPEELLDVWAHLKTGPFL-- 187

  Fly   196 KKGSSVRIECSATGNPMPNVTW---SRKNNILPNGEEKLHSHVLSIENVDRHKGGVYICTANNRV 257
             .|...|:......||     |   .|..:::...:..:.|:::.||...|       |.:...:
Mouse   188 -SGHHARLILGLQDNP-----WVCDCRLYDLVHLLDGWVSSNLIFIEARLR-------CASPRSL 239

  Fly   258 GQPASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHGETQPEVIWFK-DTMQLDTTERHIM 321
            ...|.||:.|....|||:......:.|..|....|.|...|...||:.|.: :...|:.|....:
Mouse   240 AGVAFSQLELRKCQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGTVHQEV 304

  Fly   322 ETRGSRHTLI-IRKVHPQDFGNYSCVAENQLGKARKTLQL-----------SGKPNV-------- 366
            .:.||..||: :..|...|.|:|.|.|:|.||.:...:.|           ||.|.|
Mouse   305 SSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVTEPQTSTGYSGIPGVLWARTGEG 369

  Fly   367 ---AVFNSPPISQYKDRY--NISWAVDSHSPIEEYKLSFRKLPQGHEVVGN-AIDSSSSSSSMSS 425
               |.:|:..::::....  :::.|.....|..:.:|:.:....  :|.|. :.:.|....:...
Mouse   370 AEAAAYNNKLVARHVPHMPEHVALATKPSMPSIKEELALQNFQM--DVPGEFSREPSEHQEAQMV 432

  Fly   426 SSSQMYGSGLHAHRI---GSNMGGLSGLSGSGSYSGYGNVIH--WGHNDWRNVVLPAVPVSHHYA 485
            .|.::.|...|:..:   ....|..:..|          |::  :||.|.|.:.:.....
Mouse   433 RSLKVVGDTYHSVSLVWKAPQAGNTTAFS----------VLYAVFGHRDMRRMTVEPGKT----- 482

  Fly   486 QGMSYMVRGLDPDQHYEATVQSRNRYGWSDLTNSFVFSTSSNDGPVD 532
               |..:.||.|...|.|.|..|......:  ...:|||   |..||
Mouse   483 ---SVTIEGLAPKTKYVACVCVRGLVPTKE--QCVIFST---DEVVD 521

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.