DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and Ptprq

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:717 Identity:125/717 - (17%)
Similarity:238/717 - (33%) Gaps:274/717 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LPTRSSSSSSRIAYKFECH---SNSKQNSKTGKMAAEARTISKPGHIRDRRVGSL---PHILFLA 64
            ||.||.:.   |..|:..:   |||.          |||||....  ....:|.|   .|.: :.
Mouse   782 LPPRSPNG---IIQKYTIYLKRSNSH----------EARTIETTS--LTLTIGGLKKYTHYV-IE 830

  Fly    65 IAVVSLHFESVSAQ--SMMTKNE-PMFISRSETFKFITGETIVL----PCEVANTDTY--VVAWK 120
            ::..:|..|.|.:.  |::|:.: |....::.:.|.::|.|::|    |.|......|  |..|.
Mouse   831 VSASTLKGEGVRSMPISILTEEDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPNGIILYYTVYVWD 895

  Fly   121 RGIAILTAGSVKV------------------------------------TPD------------- 136
            : :::.|..:.:|                                    ||:             
Mouse   896 K-VSLKTINATEVSLELSDLDYHADYSAYVTASTRFGDGKTRSSVINFRTPEGEPSDPPKDVHYV 959

  Fly   137 ------------PRVR---LVNGFNLQIRDALPTDAGDYICQIATMDPREITHTVEILVPPRIH- 185
                        |.|:   ::..:::..::...|...::.....|.:|..:|      |..||: 
Mouse   960 NLSSSSIILFWTPPVKPNGIIQYYSVYYQNTSSTFVQNFTLLEVTQEPGNVT------VSARIYK 1018

  Fly   186 ---------------------------HISTG--------GHLQVKKGSSVRIECSATGNPMPNV 215
                                       |:.|.        |:|..:..||..|          ||
Mouse  1019 LAVFSYYTFWLTASTLVGNGNKSSDVIHVYTDQDIPEGGVGNLTYESLSSTAI----------NV 1073

  Fly   216 TWSRKNNILPNG------------------EEKLHSHVLSI--ENVDRHKGGVYICTANNRVGQP 260
            :|:..:.  |||                  ...|.::..||  :|::::...::..|.:...|..
Mouse  1074 SWTPPSQ--PNGLVFYYVSLNLQQSPPRHRRPPLTTYENSIYFDNLEKYTDYIFKITPSTEKGFS 1136

  Fly   261 ASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHG---ETQPEVIWFKDTMQLDTTERHIME 322
            .:....||:....::....|::.:.:...:|.:.:...   :....::.:..|:| .|.......
Mouse  1137 ETYTAQLHIKTEEDVPDTPPIINTFKNLSSTSILLSWDPPLKPNGAILSYHLTLQ-GTHANRTFV 1200

  Fly   323 TRGSRHTLIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSPPISQYKDRYNISWAV 387
            |.|:.  :::.::.|  |..||.:|      |.:|::..|..::..|.:                
Mouse  1201 TSGNH--IVLEELSP--FTLYSFLA------AARTMKGLGPSSILFFYT---------------- 1239

  Fly   388 DSHSPIEEYKLSFRKLPQGHEVVGNAID---SSSSSSSMSSSSSQMYGSGLHAHRIGS----NMG 445
            |..:|:..        ||...::....|   .:.|.|.:.....::|...:|.|...:    |:.
Mouse  1240 DESAPLAP--------PQNLTLINYTSDFVWLTWSPSPLPGGIVKVYSFKIHEHETDTVFYKNIS 1296

  Fly   446 G------LSGLSGSGSYS---------GYGNVIHWGHNDWRNVV----LPAVP--------VSHH 483
            |      |:||....:||         |.|       |.:.|||    ..:||        |:..
Mouse  1297 GFQTDAKLAGLEPVSTYSISVSAFTKVGNG-------NQFSNVVKFTTQESVPDAVQNIACVARD 1354

  Fly   484 YAQGMSYMVRGLDPDQ-------HYEATVQSRN--------RYGWSDL--TNSFVF----STSSN 527
            : |.:|.|   .||.:       ||..||:..:        .|.::.|  ..|::|    |||:.
Mouse  1355 W-QSVSVM---WDPPRKANGIIIHYMITVEGNSTKVSPRDPMYTFTKLLANTSYIFEVRASTSAG 1415

  Fly   528 DG 529
            :|
Mouse  1416 EG 1417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 18/149 (12%)
Ig 103..177 CDD:143165 16/143 (11%)
IG_like 191..269 CDD:214653 18/97 (19%)
IGc2 198..258 CDD:197706 14/79 (18%)
I-set 273..360 CDD:254352 14/89 (16%)
Ig 290..359 CDD:143165 13/71 (18%)
FN3 <466..524 CDD:238020 20/90 (22%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020
fn3 399..>441 CDD:365830
FN3 570..654 CDD:238020
fn3 668..744 CDD:365830
FN3 762..850 CDD:238020 21/83 (25%)
fn3 857..934 CDD:365830 11/77 (14%)
FN3 951..1049 CDD:238020 10/103 (10%)
FN3 1056..1137 CDD:238020 17/92 (18%)
FN3 1152..1233 CDD:238020 15/91 (16%)
FN3 1247..1337 CDD:238020 21/104 (20%)
FN3 1342..1421 CDD:238020 19/80 (24%)
FN3 1432..1535 CDD:238020
FN3 1542..1638 CDD:238020
FN3 1645..1734 CDD:238020
UP_III_II 1759..1928 CDD:297589
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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