DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34353 and wrk-1

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001024651.1 Gene:wrk-1 / 181093 WormBaseID:WBGene00006942 Length:452 Species:Caenorhabditis elegans


Alignment Length:490 Identity:100/490 - (20%)
Similarity:174/490 - (35%) Gaps:117/490 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LAIAVVSLHFESVSAQSMMTKNEPMFISRSETFKFITGETIVLPCEVANTDTYVVAWKR------ 121
            |.:.::.|...|.||| :.||...:....        ||::.|.|||.:....:: |::      
 Worm     4 LVLLILGLLIASTSAQ-IRTKGGTLIAKE--------GESLTLRCEVEDPSVAII-WRKNTEVVA 58

  Fly   122 ----------GIAILTAGSVKVTPDPRVRLVNGFNLQIRDALPTDAGDYICQIATMDPREITHTV 176
                      |..|...||..|....||..:|..|.....|.|..:..::.::....|.:::...
 Worm    59 VDDEILDTYGGYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQVFKPTQVSVKP 123

  Fly   177 EILVPP--RIHHISTGGHLQVKKGSSVRIECSA-TGNPMPNVTWSRKNNILPNGEEKLHSHV-LS 237
            .:::.|  .::|...|       ..::.|.|.. .|||.|.|.|:::...||...::.|... :.
 Worm   124 LVVISPDTGVYHARVG-------EKNLVITCHVKEGNPKPGVVWTKQAAKLPEDIKREHGGARIV 181

  Fly   238 IENVDRHKGGVYICTANNRVGQPASSQVVLHVL--------FSPEISVERPVVFSGEGHEATLVC 294
            |..|.:|..|.|.|.|.|..|...:: :.:||.        ..|.:..|...:...:...|:..|
 Worm   182 ITEVKKHHAGKYNCLAENIAGSDRAT-IDIHVAEPLQGEREEKPWVKNEDTFIPVRKNQNASFWC 245

  Fly   295 IVHGETQPEVIW--------FKDTMQLDTTERHIMETRGSRHTLIIRKVHPQDFGNYSCVAENQL 351
            ...|...|:|.|        |.|.....|:|........|:.||.:..:..:.||:|:|...|:|
 Worm   246 TYDGTPVPQVEWLFNGYKINFNDEKFKKTSETAQRLNGYSKSTLTVGDISEEAFGDYACRISNKL 310

  Fly   352 GKARKTLQLSGKPNVAVFNSPPISQYKDRYNISWAVDSHSPIEEYKLSFRKLPQGHEVVGNAIDS 416
            |.....:.:||:|      .||...: |...::|.|.:...|.||:|..|.     |...:.:..
 Worm   311 GSVTAVVHVSGRP------GPPQLSF-DESELTWTVRAFDKILEYQLCHRL-----ENADHFLPE 363

  Fly   417 SSSSSSMSSSSSQMYGSGLHAHRIGSNMGGLSGLSGSGSYSGYGNVIHWGHNDWRNVVLPAVPVS 481
            ..:|..:..|.:.                                    |.:.|.:    .:.:|
 Worm   364 DCNSVRVKKSDNN------------------------------------GDDKWTH----TIDLS 388

  Fly   482 HHYAQGMSYMVRGLDPDQHYEATVQSRNRYGWSDL 516
            .....|..|.|:           :::||..||..:
 Worm   389 TFLEHGNKYHVQ-----------LKARNALGWGSM 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 19/95 (20%)
Ig 103..177 CDD:143165 17/89 (19%)
IG_like 191..269 CDD:214653 20/79 (25%)
IGc2 198..258 CDD:197706 19/61 (31%)
I-set 273..360 CDD:254352 22/94 (23%)
Ig 290..359 CDD:143165 20/76 (26%)
FN3 <466..524 CDD:238020 10/51 (20%)
wrk-1NP_001024651.1 IG_like 25..113 CDD:214653 18/96 (19%)
IGc2 31..96 CDD:197706 16/73 (22%)
IG_like 132..212 CDD:214653 22/87 (25%)
IGc2 142..202 CDD:197706 19/59 (32%)
IG_like 235..320 CDD:214653 20/84 (24%)
Ig 245..318 CDD:143165 19/72 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8517
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I3357
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28857
OrthoDB 1 1.010 - - D332048at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14108
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.980

Return to query results.
Submit another query.