DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and igcm-2

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:653 Identity:142/653 - (21%)
Similarity:222/653 - (33%) Gaps:238/653 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GETIVLPCEVA--NTDTYVVAWKR-GIAILTAGSVK---VTPDPRVRLV-NGF-NLQIRDALPTD 156
            |..|.|||.::  |.:::.:.|:: |..||:|...:   |||..:.||. :|| .:.|......|
 Worm    28 GAPITLPCSISLFNEESFSLDWRKDGQLILSAFGQEQGHVTPTLQGRLARDGFLGITIHSVTDGD 92

  Fly   157 AGDYICQIA------TMDPREITHTVEILVPPRIHHISTGGHLQVKKGSSVRIECSATGNPMPNV 215
            ||.|.|.:.      |...:.::..:.:.|||.|...|....:..|.|:.:..||.|.|.|.|.:
 Worm    93 AGVYQCIVTKFSKQPTRPEKGLSAKLVVNVPPVIISPSKNAIIHKKVGADLIFECKAEGAPSPEI 157

  Fly   216 TWSRKNNI-----------LPNGEEKL-------------------------------------- 231
            ||||...|           |..|::.|                                      
 Worm   158 TWSRNEQIISTSPVLTLSNLEEGDKGLYTCLAVNIEGNSTSSIDVRFTKATILDLIPLNKTVIEG 222

  Fly   232 -----HSHV---------------------------------LSIENVDRHKGGVYICTANNRVG 258
                 |.|.                                 ||:::|.:...|.|.|.|.|..|
 Worm   223 SNVFWHCHANAQATAISYSWLFEKKPIKTTSLGLRSNIRSGDLSLQDVRKSDSGWYTCEAKNSAG 287

  Fly   259 QPASSQVVLHVLFSPE-ISVERPVVFSGEGHEATLVC-IVHGETQPEVIWFKDTMQLDTTERHIM 321
            :..||...|||.:.|| :|..:||.....|...|:.| ::...|.....|.|:        .|.:
 Worm   288 ETTSSTAYLHVFYPPEPLSSHQPVQTVASGRNTTVSCDVIANPTPTSYTWSKN--------GHYL 344

  Fly   322 ETRGSRHTLIIRKVHPQDFGNYSCVAENQLGKAR--KTLQLSGKPNVAVFNSPPISQYKDRYN-- 382
            .|:.|.| :||....|.|.|.|.|.|:|..||..  :|..:..:|  .||...|.|:.|.|..  
 Worm   345 PTQASSH-IIISYAKPGDGGIYGCQADNIAGKGSIVETHLIVAEP--PVFTVAPPSEIKVRLGDQ 406

  Fly   383 --------------ISWAVDSHSPIEEYKLSFRKLPQ----GHE-VVGNAIDSSS---------- 418
                          :.|..|. ..|.:..|:|:|:..    .:| ||.|::::.|          
 Worm   407 VSIPCQGFGDPMPIVYWIRDK-KRINQSTLTFKKVEHLDHGAYECVVANSVETISTRVMLLVEIT 470

  Fly   419 -------------SSSSMSSSSSQMYGSG------LHA--------------------------- 437
                         :||||..|.:..|..|      :||                           
 Worm   471 KPQMASSIKFTCLNSSSMRISWTPGYNGGFDQTFAVHAQNDVTLQWTSIKTSLNETILDHLEPFV 535

  Fly   438 -HRIGSNMGGLSGLSGSGSYS----------------GYGNVIHWGHNDWRNVVLPAVPVSHHYA 485
             :|:........|.:.|.:|:                || |.:.|                 ..|
 Worm   536 SYRVSIESVNAKGSTNSTTYNRRSCTSLHAPDKLYFCGY-NELCW-----------------TAA 582

  Fly   486 QG-MSYMVRG-LDPDQHYE---ATVQSRNRYGWS-DLTNSFVF---STSSNDGPVDLSTFLNHGL 541
            :| .||.:.. .:|.::::   ..:::..|.|.. |.|...:|   ||..:..|.:.|..|.:|:
 Worm   583 EGASSYRIESRTEPSKNFQPLAEVLETYYRLGKDVDETKQTIFRVRSTRPSYPPSEPSNALRYGI 647

  Fly   542 SDN 544
            :||
 Worm   648 ADN 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 25/93 (27%)
Ig 103..177 CDD:143165 24/87 (28%)
IG_like 191..269 CDD:214653 30/164 (18%)
IGc2 198..258 CDD:197706 25/146 (17%)
I-set 273..360 CDD:254352 27/90 (30%)
Ig 290..359 CDD:143165 21/71 (30%)
FN3 <466..524 CDD:238020 10/66 (15%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653 24/72 (33%)
Ig 124..200 CDD:386229 19/75 (25%)
IG_like 214..298 CDD:214653 14/83 (17%)
Ig_3 309..371 CDD:372822 20/70 (29%)
Ig 389..467 CDD:386229 17/78 (22%)
FN3 476..548 CDD:238020 10/71 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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