DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and Ncam1

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:536 Identity:124/536 - (23%)
Similarity:203/536 - (37%) Gaps:114/536 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 QSMMTKNEPMFISRSETFKFITGETIVLPCEVANTDTYVVAWKRGIAILTAGSVKVTPDPRVRLV 142
            |.:|.||.|    ..:.||  .||..|:.|:|.::....:.||.     ....|.:..|.|..::
Mouse   116 QKLMFKNAP----TPQEFK--EGEDAVIVCDVVSSLPPTIIWKH-----KGRDVILKKDVRFIVL 169

  Fly   143 NGFNLQIRDALPTDAGDYICQIATMDPREITH---TVEILVPPRIHHISTGGHLQVKKGSSVRIE 204
            :...||||....||.|.|.|:...:...||..   .|.:.|||.:....:..:.....|.||.:.
Mouse   170 SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLV 234

  Fly   205 CSATGNPMPNVTWSRKNNILPNGEEKLHSHV-------LSIENVDRHKGGVYICTANNRVGQPAS 262
            |.|.|.|.|.::|::....:.|.||....|:       |:|.|||::....|:|.|.|:.|:..:
Mouse   235 CDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDA 299

  Fly   263 SQVVLHVLFSPEIS-VERPVVFSGEGHEATLVCIVHGETQPEVIWFKDTMQLDTTER-------- 318
            | :.|.|...|:|: ||.......| .:.||.|...|:..|.:.|...|..:.:.|:        
Mouse   300 S-IHLKVFAKPKITYVENQTAMELE-EQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEK 362

  Fly   319 ------HIMETRGSR-HTLIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSP---- 372
                  |::....:| .:|.::.:...|.|.|.|.|.|.:|:..:::.|.      |..:|    
Mouse   363 QETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLE------VQYAPKLQG 421

  Fly   373 PISQYKDRYN---------------ISWAVD-------SHSPIEEY---KLSFRKL-PQGHEVVG 411
            |::.|....|               |||..|       ::|.|:.|   ..|:.:: |......|
Mouse   422 PVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFG 486

  Fly   412 N-------------------AIDSSSSSS----SMSSSSSQMYGSGLHAHRIGSNMGGLSGLSGS 453
            |                   ..|:.||.|    ...||::|:......|      .||:..|...
Mouse   487 NYNCTAVNRIGQESLEFILVQADTPSSPSIDRVEPYSSTAQVQFDEPEA------TGGVPILKYK 545

  Fly   454 GSYSGYGNVIHWGHNDWRNVVLPAVPVSHHYAQGMSYMVRGLDPDQHYEATVQSRNRYGWSDLTN 518
            ..:...|.. .| |..|.:       ......:|: ..:.||.|:..|...:.:.|..|..:::.
Mouse   546 AEWKSLGEE-SW-HFKWYD-------AKEANMEGI-VTIMGLKPETRYSVRLAALNGKGLGEISA 600

  Fly   519 SFVFSTSSNDGPVDLS 534
            :..|.|.....|..|:
Mouse   601 ATEFKTQPVHSPPPLA 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 22/82 (27%)
Ig 103..177 CDD:143165 19/76 (25%)
IG_like 191..269 CDD:214653 25/84 (30%)
IGc2 198..258 CDD:197706 22/66 (33%)
I-set 273..360 CDD:254352 23/102 (23%)
Ig 290..359 CDD:143165 18/83 (22%)
FN3 <466..524 CDD:238020 10/57 (18%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652 21/76 (28%)
Ig3_NCAM-1_like 211..308 CDD:143207 28/97 (29%)
Ig_NCAM-1 307..413 CDD:143277 24/112 (21%)
Ig_3 417..494 CDD:372822 15/76 (20%)
FN3 509..606 CDD:238020 23/112 (21%)
fn3 649..731 CDD:365830
PHA03247 <905..1140 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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