DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34353 and Dscaml1

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:543 Identity:121/543 - (22%)
Similarity:209/543 - (38%) Gaps:111/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 IAVVSLHFESVSAQSMMTKNEPMFISRS-ETFKFITGETIVLPCEVANTDTYVVAWKRGIAILTA 128
            |..|:..|.|..|..::|..:|:.::.: :..|...|.|::|.|.:..:..:.:.|.|...::..
Mouse   293 ICEVTNTFGSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLP 357

  Fly   129 GSVKVTPDPRVRLVNGFNLQIRDALPTDAGDYICQIATMDPREITHTVEILV---PPRIHHISTG 190
            |..     ..:|.::...|.|..|..:.:|.|.| .||...:.......|::   .|||  :|:.
Mouse   358 GEA-----ISIRGLSNETLLISSAQKSHSGAYQC-FATRKAQTAQDFAIIVLEDGTPRI--VSSF 414

  Fly   191 GHLQVKKGSSVRIECSATGNPMPNVTWSRKNN-ILPNGEEKLHSHVLSIENVDRH---------K 245
            ....|..|....:.|:|.|.|.|.|||:..:. ::.:|..:.:.:.:|......|         .
Mouse   415 SEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRD 479

  Fly   246 GGVYICTANNRVGQPASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHGETQPEVIWFKDT 310
            ||||.|||.|.||. |..|..::|...|.|...|.:. :..|.:..:.|.|.|.....:.|:||.
Mouse   480 GGVYRCTARNSVGS-AEYQARINVRGPPSIRAMRNIT-AVAGRDTLINCRVIGYPYYSIKWYKDA 542

  Fly   311 MQLDTTERHIMETRGSRHTLIIRKVHPQDFGNYSC--VAENQLGKARKT-LQLSGKPNVAVFNSP 372
            :.|....|.::...|:.....::|  ..|.|.|.|  :.:.||..::.. :.:...|.:..|..|
Mouse   543 LLLPDNHRQVVFENGTLKLTDVQK--GMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFP 605

  Fly   373 PISQYKDRYNISWAVDS-HSPIEEYKLSFRKLPQGHEVV---GNAIDSSSSSSSMSSSSSQMYGS 433
            |.|..:..| |...|.| ..||   ::::||  .|..::   |..|:|....||:..||..:..:
Mouse   606 PASIGQLLY-IPCVVSSGDMPI---RITWRK--DGQVIISGSGVTIESKEFMSSLQISSVSLKHN 664

  Fly   434 GLH-------AHRIG-----------------SNMGGLSGLSG--SGSYSGYGNVIHWGHNDWRN 472
            |.:       |..:.                 :|..|:.|.:|  :.|..||             
Mouse   665 GNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGY------------- 716

  Fly   473 VVLPAVPVSHHYAQGMSYMVRGLDPDQHYEATVQSRNRYGWSDLTNSFVFSTSSNDGPVDLSTFL 537
               |...|...:|:|..      :|.|::...:..|.:.    |.||              |..:
Mouse   717 ---PPPKVMWKHAKGSG------NPQQYHPVPLTGRIQI----LPNS--------------SLLI 754

  Fly   538 NHGLSDNEMRDLSVTFYGSSAIN 560
            .|.|.::      :.:|...|.|
Mouse   755 RHVLEED------IGYYLCQASN 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 17/79 (22%)
Ig 103..177 CDD:143165 14/73 (19%)
IG_like 191..269 CDD:214653 25/87 (29%)
IGc2 198..258 CDD:197706 20/69 (29%)
I-set 273..360 CDD:254352 20/89 (22%)
Ig 290..359 CDD:143165 16/71 (23%)
FN3 <466..524 CDD:238020 10/57 (18%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764 5/17 (29%)
Ig_3 317..389 CDD:339005 15/77 (19%)
Ig 408..498 CDD:353325 28/92 (30%)
IGc2 519..577 CDD:197706 15/59 (25%)
Ig 615..681 CDD:319273 17/70 (24%)
Ig_DSCAM 707..785 CDD:143211 20/111 (18%)
Ig 803..891 CDD:353325
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.