DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34353 and ncam1b

DIOPT Version :9

Sequence 1:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_005157462.1 Gene:ncam1b / 114442 ZFINID:ZDB-GENE-010822-2 Length:1055 Species:Danio rerio


Alignment Length:537 Identity:115/537 - (21%)
Similarity:211/537 - (39%) Gaps:132/537 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GETIVLPCEVANTDTYVVAWKRGIAILTAGSVKVTPDPRVRLVNGFNLQIRDALPTDAGDYIC-- 162
            |.:.:|.|:.......:|.|:|..|.|.:|:.....:      :|..:.:.|....|.|||.|  
Zfish   225 GFSTLLACDPDGFPEPIVTWRRNNAPLESGNKYSFNE------DGSEMTVLDVTKLDEGDYTCIA 283

  Fly   163 -QIATMDPREITHTVEILVPPRIHHISTGGHLQVKKGSSVRIECSATGNPMPNVTWSRKNNILPN 226
             ..|....:|:  ::::.|.|:|.::.:  ....:....|.:.|.|||:|.|.:|||....:...
Zfish   284 KNKAGESEQEL--SLKVFVQPKITYLES--QTTTEMDEQVTLTCEATGDPTPTITWSFGTRVFTE 344

  Fly   227 GEEKLHSHV--LSIENVDRHKG--------------------------GVYICTANNRVG---QP 260
            ||::....:  .|....::|||                          |.|:|||.|.:|   ||
Zfish   345 GEQEQQKRIYQASWTRPEQHKGPDGEVLVRSDARVSSLTLKYPQYTDAGQYLCTARNAIGETVQP 409

  Fly   261 ASSQVVLHVLFSPEI--SVERPVVFSGEGHEATLVC-IVHGETQPEVIWFKDTMQL---DTTERH 319
            .|    |.|.::|:|  ||   .|::.||:.|.:.| ::...:...:.|.:|..||   :|:...
Zfish   410 VS----LEVRYAPKILGSV---AVYTWEGNPANISCEVLAHPSDVSITWLRDGFQLPNANTSNIK 467

  Fly   320 IMETRGSRHTLIIRKVHPQ---DFGNYSCVAENQLG-KARKTLQLSGKPNVAVFNSPPISQ---Y 377
            |..|..:.:.    :|:|:   |||||:|...|::| ::|:.:.:...    |.::|.|.:   |
Zfish   468 IHNTPSASYL----EVNPESQSDFGNYNCTTSNEIGTESREFIMIPAD----VPSAPSIGEVQPY 524

  Fly   378 KDRYNISWAVDSHS---PIEEYKLSFRKLPQGHEV-----VGNAIDSSSSSSSMSSSSSQMYGSG 434
            .....:.:.....:   |:.:|:..:|.:.:|..|     |.:.:.|.:.:.....:..::..|.
Zfish   525 SSTAQVLFEEPESTGGVPVLKYRAEWRAVGRGKWVQRVYEVKDGLSSVTVTGLKPETDYEVKMSA 589

  Fly   435 LHAHRIGSNMGGLSGLSGSGSYSGYGNVIHWGHNDWRNVVLPAV--------------------- 478
            ::....|.:...:...:....||....:.|:...|......|.:                     
Zfish   590 INGKGEGDSSPSMVFKTEHVRYSYTNGIFHFHTEDTEGEPSPPILEGTLQPKGNSLKVKWIKQDD 654

  Fly   479 ---PVSHHYAQ-----------------GMSY-MVRGLDPDQHYEATVQSRNRYGWSDLTNSFVF 522
               |::|:..:                 |..| |:.|||.|..|:..|.:.|:.|.|. ..:..|
Zfish   655 GGSPITHYLVRYKAREDSEWKPEIRLPSGSEYVMLIGLDWDTEYDVFVVAENQQGKSK-PGTLTF 718

  Fly   523 STSS---------NDGP 530
            .|||         .|||
Zfish   719 RTSSEPTATTDSMEDGP 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 18/82 (22%)
Ig 103..177 CDD:143165 17/76 (22%)
IG_like 191..269 CDD:214653 27/108 (25%)
IGc2 198..258 CDD:197706 22/87 (25%)
I-set 273..360 CDD:254352 27/96 (28%)
Ig 290..359 CDD:143165 20/76 (26%)
FN3 <466..524 CDD:238020 17/99 (17%)
ncam1bXP_005157462.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..205 CDD:214653
IGc2 128..189 CDD:197706
Ig 208..301 CDD:299845 18/83 (22%)
I-set 212..298 CDD:254352 18/80 (23%)
I-set 298..414 CDD:254352 30/121 (25%)
Ig 300..414 CDD:299845 30/119 (25%)
IG_like 426..505 CDD:214653 23/82 (28%)
Ig 434..505 CDD:143165 20/74 (27%)
FN3 513..606 CDD:238020 12/92 (13%)
FN3 629..720 CDD:238020 16/91 (18%)
Chorion_3 <815..1019 CDD:253174
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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