DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34370 and CG42613

DIOPT Version :9

Sequence 1:NP_001097404.2 Gene:CG34370 / 5740565 FlyBaseID:FBgn0085399 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001247185.1 Gene:CG42613 / 42269 FlyBaseID:FBgn0261262 Length:1188 Species:Drosophila melanogaster


Alignment Length:1002 Identity:221/1002 - (22%)
Similarity:344/1002 - (34%) Gaps:324/1002 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GGGGSGS-SSDVSRDHCNKTVD-IFEDISSPEVSNQNVGRPLTCWYRFRTLKGAPRDFVLRLRFK 125
            ||..:|| |:.:..:|.|.:.. ::..::.|       |:.:...::...|:|:|.|        
  Fly   280 GGPQNGSFSAPLLHNHRNHSRQCLYTFLAGP-------GQRVEVVFKSFNLRGSPPD-------- 329

  Fly   126 KFKVGQLLNATHCEGGYLQI---VDGNAKTDVSNRREPGMFCGEAEQPQTFISETSYVKVLFHTD 187
            ...||:|.:..|   .|:.|   |..:...::.|....|.:||.. .|:..||....|.:.|.::
  Fly   330 GSAVGELPSCVH---EYMDIYSEVQSSEPAELINSPFGGRYCGTI-PPRRRISMYRAVAISFFSN 390

  Fly   188 -NFTDQTY---FTFDSRAEQQTEVYL-----RYGQHPELYPNRRGEVVQGSYCEREYRDCRLQTC 243
             |.|...:   |.|.:.:|.:..:.:     .|...|.:..|:.|.::                 
  Fly   391 KNVTTDLFEGTFRFINASEYEIGIPIAGSPCSYTITPSMSVNKTGALI----------------- 438

  Fly   244 YVQSPAYPGLYPRALNCRYKLHTRQPYIKLYLQNEQFAVDGQRCENVMTCPIRPIGSGNEHCPYD 308
               ||.|||.||:.::|.|:.        |...|::..::.:..:         :..|..|||:|
  Fly   439 ---SPTYPGAYPKDMSCTYQF--------LGESNQRVRLEFRDFD---------LFFGGPHCPFD 483

  Fly   309 WLAVYDGRDEHSPLIGKFCGLGKFPFSIIGTSQYMYVEFVT-SPAGPLLNTGF--------HFNV 364
            ::.||||.|..|.|||.:||..: ...:..:...::|.|.| |......|.||        .|..
  Fly   484 YVKVYDGPDNSSALIGTYCGQQR-NLVLYSSESSLFVHFYTLSRTANTQNRGFKGIYEFSESFVK 547

  Fly   365 GNWPGHVETAGIKHGVCDWLLSSDSLKDSSASEGIFLSIAHWYP--PNTSCSYHIKG-----HVG 422
            .::....:...|:...||     ..:.....|.|..||..:.||  |.|.|.|.|.|     |: 
  Fly   548 LDFIRENDGIHIRGSECD-----QKILSKKESTGFVLSPNYPYPYIPKTVCRYFIYGMQDAQHL- 606

  Fly   423 EIVRLYFPSFRINRIESPILKYEGDCGES-LTIY--DSDHADPARIIKTFCDTFSRPM---EKVD 481
            |.|||.|.:|.|.::|... |.|.:|.:. |.||  ..:.||.       .|.|...:   |...
  Fly   607 ERVRLEFNAFNIPKVEHKD-KSESNCTDGYLKIYLKGQETADA-------YDKFDYELCGNETQR 663

  Fly   482 FVSTSPSLYVQFDSKTGSYSGSSLYYWAHYDFFNNTRF-GDPVPNTLCDEVMYAWKHPGGRLRSP 545
            .:|..|.|.:.|.|  |...|..  :...|.|....:. |...|:..|.....:    ..:.|..
  Fly   664 VISEGPRLAMVFSS--GELQGRG--FKGKYTFETEYKIPGTAAPDGTCSFTYVS----SSKKRGE 720

  Fly   546 LNSLIFKRTGGSDVRCQYKFVTDRRLYARAIIEVNSV--SFK-ELPYNSNACT------RCHEER 601
            |||..:.....||..|.|.|:      |.|..:|..|  .|| :...|:||..      .|.|:.
  Fly   721 LNSPRYPSNYPSDTNCSYLFL------AEADEQVTIVFDHFKIKADNNANATAGAYGSGACFEDW 779

  Fly   602 VDKLVIWEERDKYQNNLACFCDNI-------PR---AVRVISSADQMNLEMIVQGQHAITSYFKN 656
            ::..|::  ||.....|..:|...       ||   .:|:....||   |.:..|          
  Fly   780 LEMYVVY--RDNNDRLLGRYCGQTAPGPVESPRGAVGLRITLHTDQ---ESVASG---------- 829

  Fly   657 PNPLFEATYEFAHGPL----CGP---------ITLGPSPDGELVFPYKKALAMVSGPMAPPEHHY 708
                |:|.|.|.....    ||.         ||....|.|     ||           .|....
  Fly   830 ----FKARYFFESAKSDAGDCGGNFSNQDSGLITSPNWPAG-----YK-----------APGRGM 874

  Fly   709 RREKCIWELKVAAQRDLWLNLEKARF----ADRSCDSAKIEVYLAGRLEPRFVVCPENISLARDL 769
            ....|.|.:|......|.::.|:...    |:|.|.:|.:.:::             |:.     
  Fly   875 ASNACNWVMKARPGYKLSIHFEQFGLEGDPANRGCPAAVLRLWM-------------NVD----- 921

  Fly   770 PILTTAELGATGADQEPL------PVLIQ--YTGDGQP------------GRNIFRLVWTELFHL 814
                        :||.||      |.:.|  ||..||.            |...||:||||    
  Fly   922 ------------SDQPPLELCGEKPPVEQWHYTSTGQTARISFTTSDKTVGAQGFRIVWTE---- 970

  Fly   815 PRNPDGSLAASLLQDGG---------CD----FRCPGDTEVCIPKHLLCNGIANC-PNVTHTSTL 865
                        :||.|         |:    |:|  ....||...|.|:|:.|| |.       
  Fly   971 ------------IQDSGPGPPSVGLHCESTYHFQC--GAGYCISDKLRCDGVKNCGPG------- 1014

  Fly   866 SQLTRHIEWNLEQLGLLHHAGDYQQLVLHDESPEICLKRDLSELPYGKLSLIALGLCLMFALLFA 930
                                         |::.|:....:.:|..|..|.:|.|   |:.:.|..
  Fly  1015 -----------------------------DDTDELHCTTEAAEEDYDVLIIITL---LVVSSLIC 1047

  Fly   931 ILRRMC----------RSSSLHQGRHH 947
            :|..:|          |...||:..|:
  Fly  1048 LLCILCHSRRSRRNHVRQLGLHRNAHY 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34370NP_001097404.2 CUB 88..195 CDD:238001 24/113 (21%)
CUB 244..363 CDD:238001 34/127 (27%)
CUB 407..509 CDD:238001 35/114 (31%)
CG42613NP_001247185.1 CUB 277..404 CDD:238001 32/142 (23%)
CUB 421..541 CDD:238001 38/157 (24%)
CUB 564..691 CDD:238001 42/144 (29%)
CUB 707..836 CDD:238001 36/157 (23%)
CUB 846..969 CDD:238001 33/168 (20%)
LDLa 987..1022 CDD:238060 12/72 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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