DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34370 and CG15253

DIOPT Version :9

Sequence 1:NP_001097404.2 Gene:CG34370 / 5740565 FlyBaseID:FBgn0085399 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_609758.1 Gene:CG15253 / 34916 FlyBaseID:FBgn0028948 Length:253 Species:Drosophila melanogaster


Alignment Length:237 Identity:56/237 - (23%)
Similarity:85/237 - (35%) Gaps:69/237 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CGLLMLLLLLQLVGERLATPSPSSMQAPQKRGGSGSGGGGGGGGGGGGGGGSGSSSDVSRD---- 76
            |...:|||||.:|....|.||......|:...|...          |....||||.::.|:    
  Fly     2 CYYSILLLLLVVVNVAWAAPSIRIETDPELTAGYIE----------GDMVPSGSSRNIWRNETYR 56

  Fly    77 --------HCNKTVDIFEDISSPEVSNQNVGRPLTCWYRFRTLKGAPRDFVLRLRFKKFKVGQLL 133
                    |.|..:|  |:..:..||.......::|    .|.|.|..|       :|:.|    
  Fly    57 WPNRIIYYHINSYID--EEHRNHIVSAIQKIESISC----LTFKEATTD-------QKYYV---- 104

  Fly   134 NATHCEGG---YLQIVDGNAKTDVSNRREPGMFC--------------GEAEQPQTFISETSYVK 181
            |.|..|||   |:..::...:.::.| .|.|:.|              |...| |:......||:
  Fly   105 NVTSEEGGCFSYIGYLNRVQQLNLQN-NEIGVGCFRLYTIVHEFLHALGFFHQ-QSAADRDDYVQ 167

  Fly   182 VLFHTDNFTDQTYFTFDSRAEQQT----EVY-----LRYGQH 214
            ::  .:|.|:...|.||...|:..    |.|     :.||.:
  Fly   168 IV--EENITEGMEFNFDKYTEETVNDFGEKYDYGSVMHYGPY 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34370NP_001097404.2 CUB 88..195 CDD:238001 26/123 (21%)
CUB 244..363 CDD:238001
CUB 407..509 CDD:238001
CG15253NP_609758.1 Astacin 55..250 CDD:279708 38/174 (22%)
ZnMc_astacin_like 59..246 CDD:239807 38/170 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444874
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.