DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34370 and Semp1

DIOPT Version :9

Sequence 1:NP_001097404.2 Gene:CG34370 / 5740565 FlyBaseID:FBgn0085399 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster


Alignment Length:254 Identity:52/254 - (20%)
Similarity:78/254 - (30%) Gaps:113/254 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 GIFLSIAHWYPPNTSCSYHIK------GHVGEIVRLYFPSFRINRIESPILKYEGDCGESLTIYD 456
            ||...|.||  ||.:..|.|:      .|..||:|      .|:.||      |..|        
  Fly    45 GIVNQIYHW--PNRTVPYMIEDDAFADSHYREILR------AISIIE------ENSC-------- 87

  Fly   457 SDHADPARIIKTFCDTFSRPMEKVDF----VSTSPSLYVQFDSKTGSYSGSSLYYWAHYDFFNNT 517
                           ...:|..::||    |.||..|            |.:.   .|..:.|.|
  Fly    88 ---------------VIFKPATEMDFPMALVITSKGL------------GCNT---VHLGYRNKT 122

  Fly   518 RFGDPVPNTLCDEVMYAWKHPGG----RLRSPLNSLI----FKRTGGSDVRCQYKFVTDRRLYAR 574
                        :|:....:|.|    |:.|.::.|:    |:....|..|.||.          
  Fly   123 ------------QVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYV---------- 165

  Fly   575 AIIEVNSVSFKEL--PYNSNACTRCHEERVDKLVIWEERDK---YQNNLACFCDNIPRA 628
                  |:.:|.:  .||.|....      |....|.:.|:   |::.:    ..:|||
  Fly   166 ------SIQWKNINPQYNINFVNN------DNSTAWHDFDEGYDYESVM----HYVPRA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34370NP_001097404.2 CUB 88..195 CDD:238001
CUB 244..363 CDD:238001
CUB 407..509 CDD:238001 21/111 (19%)
Semp1NP_609756.1 Astacin 53..249 CDD:279708 48/246 (20%)
ZnMc_astacin_like 55..245 CDD:239807 46/242 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444813
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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