DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34293 and sptssb

DIOPT Version :10

Sequence 1:NP_001097945.1 Gene:CG34293 / 5740555 FlyBaseID:FBgn0085322 Length:84 Species:Drosophila melanogaster
Sequence 2:NP_001017215.1 Gene:sptssb / 549969 XenbaseID:XB-GENE-950653 Length:80 Species:Xenopus tropicalis


Alignment Length:59 Identity:20/59 - (33%)
Similarity:41/59 - (69%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLKHFASHAYRQYELVTCVNMLEPWEKKLINGFFLVMLLLVLFSSFMYLPNYMQTLMQF 61
            ::|.:.|..|.||.|:||..:|||||:.:.|...|.::.:|::||::::|.:::..::|
 Frog     5 HIKDYLSWLYYQYLLITCSYVLEPWEQSIFNTLLLTIIAMVIYSSYIFIPIHVRLAVEF 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34293NP_001097945.1 SPT_ssu-like 5..58 CDD:463347 19/52 (37%)
sptssbNP_001017215.1 SPT_ssu-like 7..60 CDD:463347 19/52 (37%)

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